CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
golgi 1
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra034487.1-P	Field mustard	mitochondrion	99.73	99.73
CDY08638	Canola	mitochondrion	97.59	96.04
AT1G62305.1	Thale cress	golgi	83.91	82.8
CDY31228	Canola	golgi	68.1	68.65
CDY21023	Canola	golgi	68.36	67.82
CDY34605	Canola	golgi	63.0	62.17
Solyc02g036250.1.1	Tomato	cytosol	26.01	61.78
VIT_10s0116g00980.t01	Wine grape	golgi	61.93	60.79
KRH11480	Soybean	mitochondrion	58.71	58.09
PGSC0003DMT400042390	Potato	golgi	57.91	57.6
Solyc02g080970.2.1	Tomato	plastid	57.91	55.24
PGSC0003DMT400055283	Potato	golgi	54.42	54.57
GSMUA_Achr3P28930_001	Banana	golgi	55.5	54.05
HORVU3Hr1G065000.4	Barley	cytosol	45.58	52.63
GSMUA_Achr9P21910_001	Banana	golgi	53.62	51.81
KRH36494	Soybean	mitochondrion	58.45	51.78
TraesCS3D01G258800.1	Wheat	golgi, mitochondrion, plastid	51.21	48.48
TraesCS3A01G258700.1	Wheat	golgi, mitochondrion, plastid	50.94	48.35
Zm00001d043768_P001	Maize	golgi, mitochondrion, plastid	50.67	48.34
Os01t0695200-01	Rice	plastid	46.92	48.21
CDX69574	Canola	mitochondrion	47.19	48.09
KXG33181	Sorghum	golgi, mitochondrion, plastid	50.4	48.08
CDY09869	Canola	mitochondrion	46.65	47.54
TraesCS3B01G291600.1	Wheat	plastid	51.47	46.38
CDY66259	Canola	cytosol	51.21	44.42
CDX89388	Canola	cytosol	21.45	35.09
CDY49466	Canola	cytosol	23.06	33.46
CDX80552	Canola	cytosol	13.67	33.33
CDX78440	Canola	cytosol	28.69	33.13
CDY51089	Canola	golgi, mitochondrion	34.05	32.15
CDX82625	Canola	mitochondrion	33.78	31.9
CDY31036	Canola	golgi	32.17	31.83
CDX73016	Canola	mitochondrion	29.49	31.7
CDX83505	Canola	mitochondrion	33.78	31.66
CDY12850	Canola	mitochondrion	33.78	31.66
CDX87842	Canola	golgi	32.98	31.62
CDY43927	Canola	golgi	32.98	31.62
CDY01412	Canola	mitochondrion	33.78	31.58
CDY03361	Canola	mitochondrion	33.24	31.39
CDY66853	Canola	mitochondrion	33.24	31.31
CDY46724	Canola	mitochondrion	33.51	31.02
CDX70417	Canola	cytosol	24.93	31.0
CDY28259	Canola	golgi	31.1	30.85
CDX68738	Canola	golgi	31.1	30.85
CDY30178	Canola	mitochondrion	33.24	30.85
CDY20644	Canola	golgi	32.17	30.77
CDY56916	Canola	cytosol, golgi, plasma membrane, plastid	31.37	30.71
CDY51451	Canola	golgi	31.37	30.71
CDY03552	Canola	golgi, mitochondrion	32.98	30.67
CDX69735	Canola	golgi	31.64	30.57
CDY19328	Canola	golgi, mitochondrion	30.83	30.42
CDX94911	Canola	golgi	31.37	30.39
CDX94406	Canola	golgi	30.83	30.34
CDX93443	Canola	golgi	31.1	30.21
CDX92736	Canola	mitochondrion	30.56	30.08
CDX97141	Canola	golgi	31.1	30.05
CDX97139	Canola	golgi	31.1	30.05
CDY42774	Canola	mitochondrion	30.29	29.82
CDX88613	Canola	golgi	30.83	29.56
CDY11878	Canola	golgi	30.83	29.56
CDY25922	Canola	golgi	30.83	29.56
CDY38285	Canola	golgi	30.56	29.31
CDX78439	Canola	golgi	31.37	29.18
CDX96026	Canola	golgi	30.56	28.79
CDX78674	Canola	cytosol, golgi, plasma membrane	31.1	28.78
CDX70676	Canola	cytosol, golgi, nucleus	30.83	28.61
CDX97140	Canola	golgi	31.1	28.29
CDX96025	Canola	golgi, vacuole	30.83	27.64
CDY44904	Canola	golgi	30.29	27.56
CDX81507	Canola	golgi	30.03	27.32
CDX69465	Canola	golgi	29.49	27.16
CDY59035	Canola	golgi	30.56	27.08
CDY20597	Canola	golgi	24.66	27.06
CDX70416	Canola	golgi	31.64	27.0
CDY66012	Canola	mitochondrion	25.47	26.03
CDX88209	Canola	golgi	24.13	25.71
CDY57290	Canola	cytosol	23.32	25.14
CDY70337	Canola	golgi	24.66	24.66
CDY26504	Canola	cytosol	9.65	23.68
CDY14193	Canola	mitochondrion	33.24	23.66
CDX97918	Canola	golgi	29.22	17.27
CDX73017	Canola	cytosol	0.27	7.14

Protein Annotations

EnsemblPlants:CDY24895	EnsemblPlantsGene:GSBRNA2T00028674001	GO:A0A078GEF1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008375	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042
PANTHER:PTHR31042:SF2	PFAM:PF02485	ProteinID:CDY24895	ProteinID:CDY24895.1	SEG:seg	TMHMM:TMhelix
UniParc:UPI0004EE5F85	UniProt:A0A078GEF1	MapMan:35.1	:	:	:

Description

BnaA03g59990DBnaA03g59990D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GEF1]

Coordinates

chrLK032165:-:606511..608842

Molecular Weight (calculated)

43500.3 Da

IEP (calculated)

9.916

GRAVY (calculated)

-0.388

Length

373 amino acids

Sequence
(BLAST)

001: MARRSPPQIP ASRRGVVSFR WKLITALSAS LCVLALFSIY HRESRPVRSR IPLQKYSGER PKMAFLFLAR HDLPLDFLWD RFFKGGDERN LSIYVHSTPG
101: FVFDQGTTRS HFFHNRQLKN SIEVVWGEAS MIAAERLLLA SALEEPSNQR FVLLSDSCVP LYDFGYIYTY LMSSPKSFVD SFLDTKDQRY TMKMFPVIPK
201: EKWRKGSQWI SLIRSHAEVI VNDDTVFPVF QKFCKRSLPL DPSNKWLYLK HRRHNCIPDE HYVQTLLTMR GLESEMERRT VTYTTWNLLA KKAEAKSWHP
301: LTFTSDNSGA KEIEEIKKIN HVYYETEYRT EWCRANSKPV PCFLFARKFT RGAAMRLLSE GLVESSTDTT TTS

Best Arabidopsis Sequence Match ( AT1G62305.1 )
(BLAST)

001: MPRLPSSRRG VVWFRWKILI TISTALCILA LFCINRQSNS TATTTTLSSS LSVARSRIPL VKYSGDRPKL AFLFLARRDL PLDFLWDRFF KSADQRNFSI
101: YVHSIPGFVF DESSTRSHFF YNRQLKNSIE VVWGESSMIA AERLLLASAL EDPSNQRFVL LSDSCVPLYD FGYIYRYLVS SPKSFVDSFL DKDNRYTMKM
201: FPVIRKEKWR KGSQWISLIR SHAEVIVNDD TVFPVFQKFC KRSLPLDPRK NWLYLKKRRH NCIPDEHYVQ TLLTMRGLEN EMERRTVTYT TWNLSAKKAE
301: AKSWHPLTFT SDNCGPEEIE GIKKINHVYY ESEYRTEWCR ANSKPVPCFL FARKFTRGAA MRLLSEGLIE SSIDTTTF

Arabidopsis Description

At1g62305 [Source:UniProtKB/TrEMBL;Acc:Q6DST3]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.