Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- plasma membrane 2
- nucleus 2
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400055283 | Potato | golgi | 86.62 | 36.56 |
| Solyc02g080970.2.1 | Tomato | plastid | 74.52 | 29.92 |
| HORVU3Hr1G065000.4 | Barley | cytosol | 56.05 | 27.24 |
| VIT_10s0116g00980.t01 | Wine grape | golgi | 64.97 | 26.84 |
| KRH11480 | Soybean | mitochondrion | 64.33 | 26.79 |
| Bra034487.1-P | Field mustard | mitochondrion | 61.78 | 26.01 |
| CDY24895 | Canola | mitochondrion | 61.78 | 26.01 |
| CDY08638 | Canola | mitochondrion | 61.78 | 25.59 |
| Bra031797.1-P | Field mustard | cytosol | 54.78 | 25.44 |
| CDY31228 | Canola | golgi | 59.24 | 25.14 |
| AT1G62305.1 | Thale cress | golgi | 60.51 | 25.13 |
| AT1G11940.1 | Thale cress | golgi | 61.15 | 25.07 |
| CDY21023 | Canola | golgi | 59.87 | 25.0 |
| Bra016802.1-P | Field mustard | golgi | 59.24 | 24.73 |
| GSMUA_Achr3P28930_001 | Banana | golgi | 59.87 | 24.54 |
| KRH36494 | Soybean | mitochondrion | 65.61 | 24.47 |
| Os01t0695200-01 | Rice | plastid | 55.41 | 23.97 |
| GSMUA_Achr9P21910_001 | Banana | golgi | 57.96 | 23.58 |
| Zm00001d043768_P001 | Maize | golgi, mitochondrion, plastid | 57.96 | 23.27 |
| KXG33181 | Sorghum | golgi, mitochondrion, plastid | 56.69 | 22.76 |
| CDY34605 | Canola | golgi | 54.78 | 22.75 |
| TraesCS3A01G258700.1 | Wheat | golgi, mitochondrion, plastid | 56.69 | 22.65 |
| TraesCS3D01G258800.1 | Wheat | golgi, mitochondrion, plastid | 56.05 | 22.34 |
| Solyc02g086550.2.1 | Tomato | golgi, mitochondrion | 52.23 | 21.93 |
| TraesCS3B01G291600.1 | Wheat | plastid | 56.05 | 21.26 |
| CDY66259 | Canola | cytosol | 54.78 | 20.0 |
| Solyc08g065860.2.1 | Tomato | golgi | 42.68 | 17.59 |
| Solyc06g062490.2.1 | Tomato | golgi | 40.13 | 17.03 |
| Solyc05g009130.2.1 | Tomato | golgi | 39.49 | 16.53 |
| Solyc03g121280.2.1 | Tomato | golgi, nucleus, plasma membrane | 40.13 | 16.36 |
| Solyc07g008940.2.1 | Tomato | golgi | 39.49 | 15.78 |
| Solyc05g009120.2.1 | Tomato | nucleus | 38.85 | 15.64 |
| Solyc12g036400.1.1 | Tomato | extracellular | 40.76 | 15.53 |
| Solyc01g103150.2.1 | Tomato | golgi | 38.22 | 15.11 |
| Solyc05g009110.1.1 | Tomato | golgi | 36.94 | 15.06 |
| Solyc03g119260.2.1 | Tomato | golgi, nucleus, plasma membrane | 38.22 | 14.08 |
Protein Annotations
| EnsemblPlants:Solyc02g036250.1.1 | EnsemblPlantsGene:Solyc02g036250.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0008375 |
| GO:GO:0016020 | GO:GO:0016740 | InterPro:Glyco_trans_14 | PANTHER:PTHR31042 | PANTHER:PTHR31042:SF2 | PFAM:PF02485 |
| SEG:seg | UniParc:UPI000276772C | UniProt:K4B5R8 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr2:-:30392975..30395988
Molecular Weight (calculated)
18378.2 Da
IEP (calculated)
9.018
GRAVY (calculated)
-0.341
Length
157 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRFFHDRQL KNSIKEILVG WGEASMIGAE RLLLNEALKD SANTRFVLLS ESCIPLYNFS YLYSYLTASP RSFVDSFLDK KEERYSPNMT PYVPMSKWRK
101: GSQWITLIGK HAEVVADDDV VFPVFKMFCK MHDSDGELER RKITYTEWNR KKMVGIL
101: GSQWITLIGK HAEVVADDDV VFPVFKMFCK MHDSDGELER RKITYTEWNR KKMVGIL
001: MTKKSQPQIP PPLSRRGGVV WLGWKLVIAF SVALCLLALL RIQLQYNSFT TLSFPLSVAR SQTPLHKYSG DRPKLAFLFL ARRDLPLDFM WDRFFKGVDH
101: ANFSIYIHSV PGFVFNEETT RSQYFYNRQL NNSIKVVWGE SSMIEAERLL LASALEDHSN QRFVLLSDRC APLYDFGYIY KYLISSPRSF VDSFLHTKET
201: RYSVKMSPVI PEEKWRKGSQ WIALIRSHAE VIVNDGIVFP VFKEFCKRCP PLGTNEAWLF LKQKRRNCIP DEHYVQTLLT MQGLESEMER RTVTYTVWNV
301: SGTKYEAKSW HPVTFTLENS GPEEIKEIKK IDHVYYESES RTEWCKADSK PVPCFLFARK FTNEAAMRIV SEGLIGSSAN KTL
101: ANFSIYIHSV PGFVFNEETT RSQYFYNRQL NNSIKVVWGE SSMIEAERLL LASALEDHSN QRFVLLSDRC APLYDFGYIY KYLISSPRSF VDSFLHTKET
201: RYSVKMSPVI PEEKWRKGSQ WIALIRSHAE VIVNDGIVFP VFKEFCKRCP PLGTNEAWLF LKQKRRNCIP DEHYVQTLLT MQGLESEMER RTVTYTVWNV
301: SGTKYEAKSW HPVTFTLENS GPEEIKEIKK IDHVYYESES RTEWCKADSK PVPCFLFARK FTNEAAMRIV SEGLIGSSAN KTL
Arabidopsis Description
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q8GYH0]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.