CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 4
golgi 3
plasma membrane 2
nucleus 1
extracellular 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	nucleus, plasma membrane, plastid
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH36494	Soybean	mitochondrion	96.55	86.46
VIT_10s0116g00980.t01	Wine grape	golgi	71.35	70.79
PGSC0003DMT400042390	Potato	golgi	64.72	65.07
Solyc02g036250.1.1	Tomato	cytosol	26.79	64.33
Solyc02g080970.2.1	Tomato	plastid	64.72	62.4
Bra034487.1-P	Field mustard	mitochondrion	58.09	58.71
CDY24895	Canola	mitochondrion	58.09	58.71
CDY08638	Canola	mitochondrion	58.89	58.58
PGSC0003DMT400055283	Potato	golgi	57.29	58.06
HORVU3Hr1G065000.4	Barley	cytosol	49.6	57.89
AT1G62305.1	Thale cress	golgi	57.82	57.67
CDY31228	Canola	golgi	56.5	57.57
CDY21023	Canola	golgi	56.76	56.91
AT1G11940.1	Thale cress	golgi	57.29	56.4
Bra016802.1-P	Field mustard	golgi	56.23	56.38
CDY34605	Canola	golgi	53.58	53.44
Os01t0695200-01	Rice	plastid	50.66	52.62
TraesCS3A01G258700.1	Wheat	golgi, mitochondrion, plastid	54.38	52.16
TraesCS3D01G258800.1	Wheat	golgi, mitochondrion, plastid	54.38	52.03
GSMUA_Achr9P21910_001	Banana	golgi	53.05	51.81
GSMUA_Achr3P28930_001	Banana	golgi	52.52	51.7
Bra031797.1-P	Field mustard	cytosol	45.62	50.89
KXG33181	Sorghum	golgi, mitochondrion, plastid	51.99	50.13
Zm00001d043768_P001	Maize	golgi, mitochondrion, plastid	51.99	50.13
TraesCS3B01G291600.1	Wheat	plastid	54.38	49.52
KRH56549	Soybean	golgi	47.48	49.18
KRG93228	Soybean	golgi	47.48	48.38
KRH48972	Soybean	cytosol	23.34	41.31
KRH13326	Soybean	cytosol	22.81	40.38
CDY66259	Canola	cytosol	45.62	40.0
KRH46947	Soybean	cytosol	30.77	38.54
KRH01729	Soybean	cytosol	30.77	38.54
KRH47176	Soybean	cytosol, golgi, plasma membrane	33.95	33.07
KRH05512	Soybean	nucleus	32.89	32.55
KRH15500	Soybean	nucleus	32.63	32.37
KRH44223	Soybean	cytosol, golgi, plasma membrane	33.16	32.3
KRH06031	Soybean	golgi, plasma membrane, plastid	33.16	31.73
KRH26270	Soybean	golgi	31.83	31.33
KRH19073	Soybean	golgi	32.63	31.3
KRH60391	Soybean	golgi, plastid	31.03	31.12
KRH41690	Soybean	golgi	30.5	30.91
KRH16109	Soybean	mitochondrion	31.3	29.95
KRH05009	Soybean	golgi, mitochondrion	30.77	29.44
KRH48513	Soybean	golgi	33.95	28.64
KRH02808	Soybean	golgi	31.83	28.57
KRG90861	Soybean	golgi, plasma membrane	31.3	28.03
KRH35920	Soybean	golgi, plasma membrane	30.77	27.95
KRH39163	Soybean	golgi	32.1	26.83
KRH38159	Soybean	golgi	28.91	24.94

Protein Annotations

EMBL:ACUP02009212	EnsemblPlants:KRH11480	EnsemblPlantsGene:GLYMA_15G111000	EntrezGene:100800690	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0008375	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	InterPro:Glyco_trans_14
PANTHER:PTHR31042	PANTHER:PTHR31042:SF2	PFAM:PF02485	PFscan:PS51257	ProteinID:KRH11480	ProteinID:KRH11480.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI00023D2A31	UniProt:K7MAT0	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr15:-:8693230..8697724

Molecular Weight (calculated)

43483.6 Da

IEP (calculated)

9.917

GRAVY (calculated)

-0.163

Length

377 amino acids

Sequence
(BLAST)

001: MASMARGAKR RHAVISKKML ILFSASLSCV VVLVIFSLFR FHSPKPPISI SISRVVFDGP PKIAFLFLVR RNLPLDFLWD AFFQNGDVSR FSIYVHSAPG
101: FVLDESTTRS QLFYGRQISN SIQVLWGESS MIQAERLLLA AALEDHANQR FVLLSDSCVP LYNFSYVYNY LMVSPRSFVD SFLDAKEGRY NPKMSTKIPR
201: EKWRKGSQWI TVVRKHAEVI VDDDVIFSVF KKYCKRRPPI DTSKGKLNLK LQKQHNCIPD EHYVQTLLAM HDLEGELERR TLTYTLWNQS TTKMENKGWH
301: PITFGYSNAS PQRIKEIKGI NHVYYETEYR IEWCHTNSTS VPCFLFARKF SQGAAMRLLS QEVVNHFEVS ALLATPT

Best Arabidopsis Sequence Match ( AT1G11940.1 )
(BLAST)

001: MTKKSQPQIP PPLSRRGGVV WLGWKLVIAF SVALCLLALL RIQLQYNSFT TLSFPLSVAR SQTPLHKYSG DRPKLAFLFL ARRDLPLDFM WDRFFKGVDH
101: ANFSIYIHSV PGFVFNEETT RSQYFYNRQL NNSIKVVWGE SSMIEAERLL LASALEDHSN QRFVLLSDRC APLYDFGYIY KYLISSPRSF VDSFLHTKET
201: RYSVKMSPVI PEEKWRKGSQ WIALIRSHAE VIVNDGIVFP VFKEFCKRCP PLGTNEAWLF LKQKRRNCIP DEHYVQTLLT MQGLESEMER RTVTYTVWNV
301: SGTKYEAKSW HPVTFTLENS GPEEIKEIKK IDHVYYESES RTEWCKADSK PVPCFLFARK FTNEAAMRIV SEGLIGSSAN KTL

Arabidopsis Description

Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q8GYH0]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.