CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

nucleus 1
golgi 3
plastid 1
extracellular 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	golgi
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH19073	Soybean	golgi	90.71	96.95
VIT_11s0103g00490.t01	Wine grape	golgi, plastid	71.43	74.44
PGSC0003DMT400073984	Potato	golgi	68.81	73.54
Solyc07g008940.2.1	Tomato	golgi	68.57	73.28
HORVU2Hr1G100480.3	Barley	cytosol	51.43	66.46
AT2G19160.1	Thale cress	golgi, mitochondrion	61.9	65.99
Bra036729.1-P	Field mustard	mitochondrion	61.67	65.4
AT4G30060.1	Thale cress	golgi	62.38	65.34
CDY66853	Canola	mitochondrion	61.43	65.15
Bra010307.1-P	Field mustard	golgi, mitochondrion	61.9	64.84
CDY03552	Canola	golgi, mitochondrion	61.67	64.59
CDY03361	Canola	mitochondrion	60.71	64.56
Zm00001d026261_P001	Maize	golgi, mitochondrion	58.81	64.49
CDX89388	Canola	cytosol	35.0	64.47
EES12818	Sorghum	golgi	59.29	64.34
CDX83505	Canola	mitochondrion	60.24	63.57
CDY12850	Canola	mitochondrion	60.24	63.57
Zm00001d002382_P002	Maize	golgi, mitochondrion	58.57	63.57
Bra012167.1-P	Field mustard	mitochondrion	60.24	63.41
CDY01412	Canola	mitochondrion	60.24	63.41
KRH16109	Soybean	mitochondrion	59.29	63.2
CDY46724	Canola	mitochondrion	60.24	62.78
KRH05009	Soybean	golgi, mitochondrion	58.81	62.69
CDY30178	Canola	mitochondrion	60.0	62.69
KXG24737	Sorghum	golgi	57.14	62.66
TraesCS2D01G428700.2	Wheat	mitochondrion	56.43	62.37
CDY51089	Canola	golgi, mitochondrion	58.57	62.28
Bra024111.1-P	Field mustard	mitochondrion	55.24	61.87
AT5G57270.5	Thale cress	golgi	56.9	61.6
TraesCS2B01G452200.4	Wheat	mitochondrion	55.71	61.58
Bra038843.1-P	Field mustard	mitochondrion	58.33	61.56
Zm00001d024348_P002	Maize	mitochondrion	54.05	61.35
CDX82625	Canola	mitochondrion	57.62	61.27
CDY38285	Canola	golgi	56.19	60.67
TraesCS2A01G430900.2	Wheat	mitochondrion	55.71	60.62
Bra002743.1-P	Field mustard	golgi	55.95	60.41
CDY11878	Canola	golgi	55.71	60.15
CDY25922	Canola	golgi	55.71	60.15
CDX88613	Canola	golgi	55.71	60.15
Bra013927.1-P	Field mustard	golgi, plastid	51.43	59.02
AT4G25870.1	Thale cress	cytosol, golgi, mitochondrion, plastid	54.29	58.61
CDX94406	Canola	golgi	52.86	58.58
CDY49466	Canola	cytosol	35.48	57.98
Os08t0225400-01	Rice	cytosol, golgi	56.9	57.87
CDX92736	Canola	mitochondrion	52.14	57.78
CDY42774	Canola	mitochondrion	51.67	57.26
Bra019138.1-P	Field mustard	plastid	50.24	54.1
Bra010446.1-P	Field mustard	mitochondrion	49.52	53.47
CDY66012	Canola	mitochondrion	45.71	52.6
CDY14193	Canola	mitochondrion	61.9	49.62
CDY57290	Canola	cytosol	39.29	47.69
KRH48972	Soybean	cytosol	21.19	41.78
KRH13326	Soybean	cytosol	20.95	41.31
KRH01729	Soybean	cytosol	29.05	40.53
KRH46947	Soybean	cytosol	28.33	39.53
KRH05512	Soybean	nucleus	33.57	37.01
KRH15500	Soybean	nucleus	33.33	36.84
KRH56549	Soybean	golgi	30.71	35.44
KRH60391	Soybean	golgi, plastid	31.67	35.37
KRG93228	Soybean	golgi	30.95	35.14
KRH41690	Soybean	golgi	30.95	34.95
KRH47176	Soybean	cytosol, golgi, plasma membrane	32.14	34.88
KRH44223	Soybean	cytosol, golgi, plasma membrane	31.9	34.63
KRH26270	Soybean	golgi	30.95	33.94
KRH06031	Soybean	golgi, plasma membrane, plastid	31.67	33.76
KRH35920	Soybean	golgi, plasma membrane	31.9	32.29
KRH11480	Soybean	mitochondrion	28.57	31.83
KRG90861	Soybean	golgi, plasma membrane	31.43	31.35
KRH38159	Soybean	golgi	32.38	31.12
KRH48513	Soybean	golgi	32.86	30.87
KRH39163	Soybean	golgi	32.14	29.93
KRH36494	Soybean	mitochondrion	28.57	28.5

Protein Annotations

EntrezGene:100784132	MapMan:35.1	EMBL:ACUP02010324	EnsemblPlantsGene:GLYMA_17G060300	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0008375	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	InterPro:Glyco_trans_14
UniProt:I1MSM6	EnsemblPlants:KRH02808	ProteinID:KRH02808	ProteinID:KRH02808.1	PFAM:PF02485	PANTHER:PTHR31042
PANTHER:PTHR31042:SF1	TMHMM:TMhelix	UniParc:UPI00023D4FBC	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr17:+:4574273..4581311

Molecular Weight (calculated)

48690.0 Da

IEP (calculated)

8.275

GRAVY (calculated)

-0.186

Length

420 amino acids

Sequence
(BLAST)

001: MKTEKVWRLG GMGDMQILPG SRHRPPMKKP KWIIVLVLFV CVFLICAYIY PPQNSSTCYV FSSKGCKGFV DWLPPMPARE YTDEEIASRV VIKDILNSPA
101: VVSKNSKIAF MFLSPGSLPF ERLWDKFFQG HEGKFSVYVH ASKTKPVHVS RYFVNRDIRS DPVIWGKISM VDAERRLLAN ALQDTDNQQF VLLSDSCVPL
201: YDFEYIYEYL MYTNISFVDC FKDPGPHGNG RYSDHMLPEV EVKDFRKGAQ WFAMKRQHAI IVMADNLYYS KFRSYCQPGL EGKNCIADEH YLPTFFQMVD
301: PGGIANWSLT HVDWSERKWH PKSYRAQDVT YELLKNITSI DVSMHVTSDE KVWCMRALLI CFIENVLTSL MNNLVFPQKE VQSWPCLWNG IQKPCYLFAR
401: KFTPETLDSL LRLLANYSGP

Best Arabidopsis Sequence Match ( AT2G19160.1 )
(BLAST)

001: MKAIKGWRLG KINYMQSLPG ARHRAPTRKP IWIIAVLSLI AMFVIGAYMF PHHSKAACYM FSSKGCKGLT DWLPPSLREY SDDEIAARVV ISEILSSPRV
101: IKKSSKIAFM FLTPGTLPFE KLWDLFFQGH EGKFSVYIHA SKDTPVHTSR YFLNREIRSD EVVWGRISMI DAERRLLTNA LRDPENQQFV LLSDSCVPLR
201: SFEYMYNYMM HSNVSYVDCF DDPGPHGTGR HMDHMLPEIP REDFRKGAQW FSMKRQHAVV TVADNLYYSK FRDYCGPGVE GNKNCIADEH YLPTFFYMLD
301: PTGIANWTVT YVDWSERKWH PRKYMPEDIT LELIKNISSI DAVSRVTSEK NGVVSWTHCM WNGIKRPCYL FGRKFHADTL DKLMELFPNY TSIV

Arabidopsis Description

At2g19160 [Source:UniProtKB/TrEMBL;Acc:Q8W460]
SUBAcon: [golgi,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.