Factsheet for AT2G19160.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi

Predictor Summary:

plastid 2
mitochondrion 4
golgi 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY12850	Canola	mitochondrion	87.06	86.18
CDX83505	Canola	mitochondrion	87.06	86.18
CDY01412	Canola	mitochondrion	87.06	85.96
Bra036729.1-P	Field mustard	mitochondrion	86.29	85.86
CDY66853	Canola	mitochondrion	86.29	85.86
Bra012167.1-P	Field mustard	mitochondrion	86.8	85.71
CDY03361	Canola	mitochondrion	85.79	85.57
CDX82625	Canola	mitochondrion	82.99	82.78
CDY51089	Canola	golgi, mitochondrion	81.73	81.52
Bra038843.1-P	Field mustard	mitochondrion	81.73	80.9
AT4G30060.1	Thale cress	golgi	78.93	77.56
KRH19073	Soybean	golgi	65.74	65.9
PGSC0003DMT400073984	Potato	golgi	63.2	63.36
Solyc07g008940.2.1	Tomato	golgi	63.2	63.36
KRH02808	Soybean	golgi	65.99	61.9
AT5G57270.5	Thale cress	golgi	60.91	61.86
VIT_11s0103g00490.t01	Wine grape	golgi, plastid	61.42	60.05
AT4G25870.1	Thale cress	cytosol, golgi, mitochondrion, plastid	59.14	59.9
AT4G31350.4	Thale cress	golgi	54.82	57.45
HORVU2Hr1G100480.3	Barley	cytosol	47.21	57.23
Zm00001d024348_P002	Maize	mitochondrion	53.05	56.49
KXG24737	Sorghum	golgi	54.57	56.14
Zm00001d026261_P001	Maize	golgi, mitochondrion	54.06	55.61
Zm00001d002382_P002	Maize	golgi, mitochondrion	54.31	55.3
EES12818	Sorghum	golgi	54.06	55.04
TraesCS2D01G428700.2	Wheat	mitochondrion	52.54	54.47
TraesCS2B01G452200.4	Wheat	mitochondrion	52.03	53.95
TraesCS2A01G430900.2	Wheat	mitochondrion	52.03	53.11
Os08t0225400-01	Rice	cytosol, golgi	54.57	52.06
AT3G21310.1	Thale cress	golgi	35.28	36.29
AT5G11730.1	Thale cress	golgi	34.77	35.49
AT5G25970.2	Thale cress	golgi	34.01	34.63
AT1G73810.1	Thale cress	golgi, nucleus, peroxisome	35.53	33.49
AT1G10880.1	Thale cress	golgi	32.74	33.42
AT1G51770.1	Thale cress	golgi	34.01	33.0
AT5G14550.1	Thale cress	mitochondrion	30.2	31.57
AT1G62305.1	Thale cress	golgi	29.7	30.95
AT5G16170.1	Thale cress	golgi	32.23	30.9
AT1G11940.1	Thale cress	golgi	29.7	30.55
AT1G68390.1	Thale cress	plastid	31.47	30.39
AT1G10280.1	Thale cress	golgi	31.73	30.34
AT1G68380.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane	29.95	30.1

Protein Annotations

MapMan:35.1	EntrezGene:816433	ProteinID:AEC06853.1	ProteinID:ANM63100.1	ArrayExpress:AT2G19160	EnsemblPlantsGene:AT2G19160
RefSeq:AT2G19160	TAIR:AT2G19160	RefSeq:AT2G19160-TAIR-G	EnsemblPlants:AT2G19160.1	TAIR:AT2G19160.1	EMBL:AY062829
EMBL:BT015873	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008375	GO:GO:0016020
GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	InterPro:Glyco_trans_14	EMBL:KJ138909	RefSeq:NP_001325211.1
RefSeq:NP_849985.1	PFAM:PF02485	PO:PO:0000293	PANTHER:PTHR31042	PANTHER:PTHR31042:SF1	UniProt:Q8W460
TMHMM:TMhelix	UniParc:UPI00000A38ED	:	:	:	:

Description

At2g19160 [Source:UniProtKB/TrEMBL;Acc:Q8W460]

Coordinates

chr2:+:8309533..8314008

Molecular Weight (calculated)

45753.2 Da

IEP (calculated)

8.798

GRAVY (calculated)

-0.294

Length

394 amino acids

Sequence
(BLAST)

001: MKAIKGWRLG KINYMQSLPG ARHRAPTRKP IWIIAVLSLI AMFVIGAYMF PHHSKAACYM FSSKGCKGLT DWLPPSLREY SDDEIAARVV ISEILSSPRV
101: IKKSSKIAFM FLTPGTLPFE KLWDLFFQGH EGKFSVYIHA SKDTPVHTSR YFLNREIRSD EVVWGRISMI DAERRLLTNA LRDPENQQFV LLSDSCVPLR
201: SFEYMYNYMM HSNVSYVDCF DDPGPHGTGR HMDHMLPEIP REDFRKGAQW FSMKRQHAVV TVADNLYYSK FRDYCGPGVE GNKNCIADEH YLPTFFYMLD
301: PTGIANWTVT YVDWSERKWH PRKYMPEDIT LELIKNISSI DAVSRVTSEK NGVVSWTHCM WNGIKRPCYL FGRKFHADTL DKLMELFPNY TSIV

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.