CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

nucleus 1
mitochondrion 2
golgi 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, golgi, mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d024348_P002	Maize	mitochondrion	92.43	95.68
Os08t0225400-01	Rice	cytosol, golgi	85.9	79.66
EES12818	Sorghum	golgi	74.41	73.64
VIT_04s0008g02630.t01	Wine grape	golgi	66.58	65.22
KXG20769	Sorghum	golgi	61.36	63.17
CDX89388	Canola	cytosol	37.34	62.72
KXG20537	Sorghum	mitochondrion	61.36	62.17
EES04616	Sorghum	golgi	62.14	61.66
KRH19073	Soybean	golgi	62.66	61.07
Solyc07g008940.2.1	Tomato	golgi	62.4	60.81
VIT_11s0103g00490.t01	Wine grape	golgi, plastid	63.97	60.79
CDY28259	Canola	golgi	59.53	60.64
CDX68738	Canola	golgi	59.53	60.64
Bra011262.1-P	Field mustard	golgi	59.53	60.64
PGSC0003DMT400073984	Potato	golgi	62.14	60.56
AT4G31350.4	Thale cress	golgi	59.01	60.11
KRH16109	Soybean	mitochondrion	59.27	57.61
KRH02808	Soybean	golgi	62.66	57.14
KRH05009	Soybean	golgi, mitochondrion	58.49	56.85
CDY49466	Canola	cytosol	37.34	55.64
Bra036729.1-P	Field mustard	mitochondrion	57.18	55.3
CDY66853	Canola	mitochondrion	56.92	55.05
CDY12850	Canola	mitochondrion	57.18	55.03
CDX83505	Canola	mitochondrion	57.18	55.03
CDY03361	Canola	mitochondrion	56.66	54.94
CDY01412	Canola	mitochondrion	57.18	54.89
Bra012167.1-P	Field mustard	mitochondrion	57.18	54.89
Bra010307.1-P	Field mustard	golgi, mitochondrion	57.18	54.61
AT4G30060.1	Thale cress	golgi	57.18	54.61
AT2G19160.1	Thale cress	golgi, mitochondrion	56.14	54.57
Bra013927.1-P	Field mustard	golgi, plastid	51.96	54.37
AT5G57270.5	Thale cress	golgi	54.83	54.12
CDY03552	Canola	golgi, mitochondrion	56.66	54.11
CDY51089	Canola	golgi, mitochondrion	55.35	53.67
CDX94406	Canola	golgi	53.0	53.56
CDY11878	Canola	golgi	54.31	53.47
CDX88613	Canola	golgi	54.31	53.47
CDY30178	Canola	mitochondrion	55.87	53.23
CDX92736	Canola	mitochondrion	52.48	53.03
Bra038843.1-P	Field mustard	mitochondrion	55.09	53.02
CDX82625	Canola	mitochondrion	54.57	52.91
AT4G25870.1	Thale cress	cytosol, golgi, mitochondrion, plastid	53.52	52.7
CDY46724	Canola	mitochondrion	55.35	52.61
CDY42774	Canola	mitochondrion	51.96	52.51
Bra002743.1-P	Field mustard	golgi	53.26	52.44
CDY38285	Canola	golgi	53.26	52.44
CDY25922	Canola	golgi	53.0	52.19
Bra024111.1-P	Field mustard	mitochondrion	50.65	51.73
Bra019138.1-P	Field mustard	plastid	49.61	48.72
Bra010446.1-P	Field mustard	mitochondrion	49.09	48.33
CDY66012	Canola	mitochondrion	44.91	47.12
CDY57290	Canola	cytosol	41.51	45.95
CDY14193	Canola	mitochondrion	56.92	41.6
EER93518	Sorghum	golgi, plasma membrane, plastid	38.9	38.6
EER93516	Sorghum	golgi	36.29	36.58
EER93517	Sorghum	golgi, mitochondrion, plasma membrane	37.34	35.57
EES03971	Sorghum	golgi	36.55	35.44
KXG24124	Sorghum	cytosol, golgi, plasma membrane, plastid	36.81	34.64
EES14395	Sorghum	endoplasmic reticulum, golgi, plastid	35.25	32.77
EES11719	Sorghum	golgi, mitochondrion, peroxisome	37.6	32.29
EES02542	Sorghum	golgi	34.2	32.27
EES02543	Sorghum	golgi	33.16	31.99
EES19116	Sorghum	golgi	30.29	30.45
KXG33181	Sorghum	golgi, mitochondrion, plastid	30.81	30.18
KXG31955	Sorghum	golgi	32.11	29.29
OQU84731	Sorghum	plastid	34.2	27.29
OQU75988	Sorghum	golgi, mitochondrion, plastid, vacuole	18.8	27.17

Protein Annotations

EnsemblPlants:KXG24737	EnsemblPlantsGene:SORBI_3007G080100	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008375
GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042	PANTHER:PTHR31042:SF13
PFAM:PF02485	ProteinID:KXG24737	ProteinID:KXG24737.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI00081AC9AB
UniProt:A0A1B6PGJ8	MapMan:35.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:9392420..9404922

Molecular Weight (calculated)

45423.5 Da

IEP (calculated)

8.510

GRAVY (calculated)

-0.350

Length

383 amino acids

Sequence
(BLAST)

001: MKWYQVWKLG FDDMKSVTVP RTRASPRRRI WISVVVIFVT ITVLWAYLYP PQDYTYPVRD WFPSEPTREL TDAETAARVV FRQILSTPAF IPRNPKIAFM
101: FLTPGKLPFE KLWELFFKGH EGRYTIYVHA SREKHEHVSP IFVGRDIHSE KVGWGMISMV DAERRLLAKA LEDIDNQHFV LLSDSCVPLH NFDYVYDFLM
201: GSRHSFLDCF HDPGPHGVYR YSKNMLPEVW ESEFRKGSQW FSMKRQHAMV VIADSLYYSK FRLYCRPGME EGRNCYADEH YLPTLFHMMD PAGIANWSVT
301: YVDWSEGKWH PRSFRANDVT YERLKNMTSI DVSYHITSDE KKELLQKPCL WNGLKRPCYL FARKFYPEAL DNLVNLFSNY TIF

Best Arabidopsis Sequence Match ( AT4G30060.1 )
(BLAST)

001: MKAVKRWSIG NLADIPVSLP GARYRAPPPG RRRVWIIMVL SLITMFFIMA YMYPHHSKRA CYMISSRGCK ALADWLPPSL REYSDDEIAA RVVIREILSS
101: PPVIRKNSKI AFMFLTPGTL PFERLWDRFF LGHEGKFSVY IHASKERPVH YSRYFLNREI RSDEVVWGRI SMVDAERRLL ANALRDTSNQ QFVLLSDSCV
201: PLRSFEYIYN YLMHSNLSYV DCFDDPGQHG AGRHMNHMLP EIPKKDFRKG AQWFTMKRQH AVATMADSLY YSKFRDYCGP GIENNKNCIA DEHYLPTFFH
301: MLDPGGIANW TVTQVDWSER KWHPKTYMPE DITHELLNNL TSTDTLVHVT SVGMGEEIWM PCMWNGIQRP CYLFGRKFHP DTLDKLLDLF SNYTRSVTWN
401: L

Arabidopsis Description

Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q8W4E9]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.