CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
golgi 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	plastid
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d036668_P004	Maize	plasma membrane	95.5	95.5
Zm00001d046936_P002	Maize	golgi	92.06	87.66
Os06t0661900-01	Rice	golgi	86.24	85.34
TraesCS7B01G392700.1	Wheat	golgi	85.19	85.19
TraesCS7A01G489600.1	Wheat	golgi	85.19	85.19
TraesCS7D01G476000.1	Wheat	golgi	84.66	84.66
HORVU7Hr1G109810.1	Barley	golgi	84.66	84.66
EES04616	Sorghum	golgi	80.95	79.27
GSMUA_Achr7P08690_001	Banana	endoplasmic reticulum, golgi	57.14	72.97
GSMUA_Achr11P...	Banana	cytosol	55.56	72.16
GSMUA_Achr4P12520_001	Banana	golgi	69.84	67.52
GSMUA_Achr4P05750_001	Banana	golgi	69.58	67.26
KXG20769	Sorghum	golgi	61.64	62.63
EES12818	Sorghum	golgi	63.76	62.27
KXG24737	Sorghum	golgi	62.17	61.36
EER93518	Sorghum	golgi, plasma membrane, plastid	36.77	36.01
EER93517	Sorghum	golgi, mitochondrion, plasma membrane	36.51	34.33
EER93516	Sorghum	golgi	34.39	34.21
KXG24124	Sorghum	cytosol, golgi, plasma membrane, plastid	36.51	33.91
EES03971	Sorghum	golgi	34.66	33.16
EES02542	Sorghum	golgi	34.13	31.77
EES14395	Sorghum	endoplasmic reticulum, golgi, plastid	34.39	31.55
EES02543	Sorghum	golgi	33.07	31.49
EES11719	Sorghum	golgi, mitochondrion, peroxisome	36.24	30.72
EES19116	Sorghum	golgi	30.95	30.71
KXG31955	Sorghum	golgi	33.33	30.0
OQU75988	Sorghum	golgi, mitochondrion, plastid, vacuole	20.37	29.06
KXG33181	Sorghum	golgi, mitochondrion, plastid	29.37	28.39
OQU84731	Sorghum	plastid	32.8	25.83

Protein Annotations

EnsemblPlants:KXG20537	EnsemblPlantsGene:SORBI_3010G218300	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008375
GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042	PANTHER:PTHR31042:SF15
PFAM:PF02485	ProteinID:KXG20537	ProteinID:KXG20537.1	ProteinID:KXG20538.1	TMHMM:TMhelix	UniParc:UPI00022072E7
UniProt:A0A194YKR6	MapMan:35.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:56105454..56111163

Molecular Weight (calculated)

43364.4 Da

IEP (calculated)

7.969

GRAVY (calculated)

-0.178

Length

378 amino acids

Sequence
(BLAST)

001: MTVMIPQRHR ATAKKPMWII VLLSMVCIVL IGAYVFPPRR FSKCYLSASS VCTNFKDWLP SMGHRERTDE EIISSVVIRD ILSMPMPVSK NPKIALMFLT
101: PGSLPFEKLW EKFLQGHEGR YSIYVHASRE KPVHTSSLFA GRDIHSDAVV WGLISMVDAE KRLLANALED VDNQVFILLS DSCVPLHSFD YVYNYLMGTN
201: VSFVDCFKDP GPHGSGRYAP EMYPEIDERD FRKGAQWFAV TRRHALMILA DNLYYKKFKL YCKPAEGRNC IADEHYLPTL FNMVDPGGIS NWSVTNVDWS
301: EGKWHPRSYS ADDVTYDLLK NITAIDENIH VTSDDKKLVM QKPCLWNGSK RPCYLFARKF NPEALDNLLK LFTSYTSV

Best Arabidopsis Sequence Match ( AT4G31350.2 )
(BLAST)

001: MSESRQRPPF KGPRWIITLV VLVTVVVITA FIYPPRNSVA CYMFSGPGCP LYQQFLFVPT RELTDSEAAA QVVMNEIMNL PQSKTANPKL AFMFLTPGTL
101: PFEPLWEMFF RGHENKFSVY VHASKKSPVH TSSYFVGRDI HSHKVAWGQI SMVDAERRLL AHALVDPDNQ HFILLSDSCV PLFDFNYIYN HLIFANLSFI
201: DCFEDPGPHG SGRYSQHMLP EVEKKDFRKG SQWFSMKRRH AIVVMADSLY YTKFKLYCRP NMEGRNCYAD EHYFPTLFNM IDPDGIANWS VTHVDWSEGK
301: WHPKLYNARD ITPYLIRKIK SIQLAYHVTS DLKKVTTVKP CLWKGEQRPC YLFARKFNPE TLDRLMYLFP NYTSLV

Arabidopsis Description

At4g31350 [Source:UniProtKB/TrEMBL;Acc:Q8GS18]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.