Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, peroxisome, golgi
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 2
- plastid 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d026711_P001 | Maize | cytosol, golgi, plasma membrane | 89.24 | 91.08 |
| Os04t0272400-01 | Rice | golgi, nucleus, peroxisome | 69.06 | 74.76 |
| TraesCS2D01G566600.1 | Wheat | cytosol, golgi, plasma membrane | 67.04 | 71.88 |
| TraesCS2B01G616400.1 | Wheat | golgi | 66.82 | 71.29 |
| HORVU2Hr1G127680.1 | Barley | cytosol, golgi, plasma membrane | 66.59 | 71.22 |
| TraesCSU01G137600.1 | Wheat | cytosol, golgi, plasma membrane | 67.04 | 70.02 |
| EES14395 | Sorghum | endoplasmic reticulum, golgi, plastid | 57.62 | 62.38 |
| GSMUA_Achr8P32350_001 | Banana | golgi, mitochondrion | 49.33 | 55.28 |
| CDX93443 | Canola | golgi | 47.31 | 54.95 |
| CDX94911 | Canola | golgi | 47.09 | 54.55 |
| CDY31036 | Canola | golgi | 45.96 | 54.38 |
| CDY20644 | Canola | golgi | 46.64 | 53.33 |
| PGSC0003DMT400063986 | Potato | golgi | 47.09 | 52.9 |
| VIT_12s0035g01710.t01 | Wine grape | golgi | 44.62 | 52.51 |
| KRH26270 | Soybean | golgi | 44.84 | 52.22 |
| Solyc01g103150.2.1 | Tomato | golgi | 46.41 | 52.14 |
| Bra018450.1-P | Field mustard | golgi | 46.64 | 51.49 |
| Bra019951.1-P | Field mustard | endoplasmic reticulum, golgi, plastid | 47.76 | 51.45 |
| EES03971 | Sorghum | golgi | 45.52 | 51.39 |
| AT1G10280.1 | Thale cress | golgi | 46.86 | 50.73 |
| KRH06031 | Soybean | golgi, plasma membrane, plastid | 44.62 | 50.51 |
| EER93518 | Sorghum | golgi, plasma membrane, plastid | 40.58 | 46.89 |
| EER93516 | Sorghum | golgi | 39.46 | 46.32 |
| EER93517 | Sorghum | golgi, mitochondrion, plasma membrane | 41.48 | 46.02 |
| KXG24124 | Sorghum | cytosol, golgi, plasma membrane, plastid | 38.12 | 41.77 |
| EES02543 | Sorghum | golgi | 36.77 | 41.31 |
| EES02542 | Sorghum | golgi | 36.32 | 39.9 |
| KXG20769 | Sorghum | golgi | 31.61 | 37.9 |
| KXG24737 | Sorghum | golgi | 32.29 | 37.6 |
| OQU75988 | Sorghum | golgi, mitochondrion, plastid, vacuole | 21.97 | 36.98 |
| KXG31955 | Sorghum | golgi | 34.75 | 36.9 |
| KXG20537 | Sorghum | mitochondrion | 30.72 | 36.24 |
| EES12818 | Sorghum | golgi | 30.72 | 35.4 |
| EES04616 | Sorghum | golgi | 30.49 | 35.23 |
| OQU84731 | Sorghum | plastid | 37.22 | 34.58 |
| EES19116 | Sorghum | golgi | 26.68 | 31.23 |
| KXG33181 | Sorghum | golgi, mitochondrion, plastid | 26.46 | 30.18 |
Protein Annotations
| EnsemblPlants:EES11719 | EnsemblPlantsGene:SORBI_3006G282100 | EntrezGene:8080225 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0008375 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | InterPro:Glyco_trans_14 | PANTHER:PTHR31042 |
| PANTHER:PTHR31042:SF25 | PFAM:PF02485 | ProteinID:EES11719 | ProteinID:EES11719.1 | RefSeq:XP_002447391.1 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI0001A870ED | UniProt:C5YB67 | MapMan:35.1 | : | : |
Description
hypothetical protein
Coordinates
chr6:+:61215706..61218201
Molecular Weight (calculated)
49856.3 Da
IEP (calculated)
8.880
GRAVY (calculated)
-0.273
Length
446 amino acids
Sequence
(BLAST)
(BLAST)
001: MKPAGTLKSR RGSAGDEEET YIGFPVTPRK DYCWSSWLLK AVMALVILMA GVLIGLSSSA NVSRYYYYSS IGSSSLLLSS SSLHAAGSGA GNKKNNGDVV
101: ASSSSSGSNN NNKKKRKKMM TTEDDHEAPP LPPVLLDFHG FVDPGPPWGH SMSDPELFWR ASMAPRMEEY PFQRVPKVAF LFLTRGPLPF APLWERFFHG
201: HEGLYSVYVH ALPGYAGRYR PSSPFHGRQI PSGEVSWGSI TLVDAEKRLL ANALLDWSNQ RFVLVSESCV PVFNFRTVYE YLVNSAMSYV ESYNIDVPQC
301: AGRYNPRMAP EVLEEHWRKG SEWFEMSRDL AVDVVADQRY YVLFRRHCTP SCYPDEHYIP TFLHLRHGAG NANRTVTWVD WSRGGPHPAR FGKAATTSDL
401: MAAIRSNGTL CLYNGKPTTV CYLFARKFAP SALPTLLNLS TTLLDF
101: ASSSSSGSNN NNKKKRKKMM TTEDDHEAPP LPPVLLDFHG FVDPGPPWGH SMSDPELFWR ASMAPRMEEY PFQRVPKVAF LFLTRGPLPF APLWERFFHG
201: HEGLYSVYVH ALPGYAGRYR PSSPFHGRQI PSGEVSWGSI TLVDAEKRLL ANALLDWSNQ RFVLVSESCV PVFNFRTVYE YLVNSAMSYV ESYNIDVPQC
301: AGRYNPRMAP EVLEEHWRKG SEWFEMSRDL AVDVVADQRY YVLFRRHCTP SCYPDEHYIP TFLHLRHGAG NANRTVTWVD WSRGGPHPAR FGKAATTSDL
401: MAAIRSNGTL CLYNGKPTTV CYLFARKFAP SALPTLLNLS TTLLDF
001: MARGGKEEGE KHIGLLKLAQ TLSFLLIFMA GIIIGLAASS HIDRYFNSLP RMFSSTTNLQ SIPFSTPDYS NCTIIHRDCT GNDDNESDDG GVKAEKPKVR
101: DCWSIDGFVR PENLSHGMTD DELFWRASMV PVKEEYPYDR VPKVAFMFLT RGPLPMLPLW EKFFKGNEKY LSVYVHTPPG YDMNVSRDSP FYDRQIPSQR
201: VEWGSPLLTD AEKRLLANAL LDFSNERFVL LSESCVPVYN FSTVYTYLIN SAYSFVDSYD EPTRYGRGRY SRKMLPDIKL HHWRKGSQWF EVNRKIAIYI
301: ISDSKYYSLF KQFCRPACYP DEHYIPTFLN MFHGSMNANR SVTWVDWSIG GPHPATYAAA NITEGFLQSI RKNETDCLYN EEPTSLCFLF ARKFSPSALA
401: PLMNLSSTVL GF
101: DCWSIDGFVR PENLSHGMTD DELFWRASMV PVKEEYPYDR VPKVAFMFLT RGPLPMLPLW EKFFKGNEKY LSVYVHTPPG YDMNVSRDSP FYDRQIPSQR
201: VEWGSPLLTD AEKRLLANAL LDFSNERFVL LSESCVPVYN FSTVYTYLIN SAYSFVDSYD EPTRYGRGRY SRKMLPDIKL HHWRKGSQWF EVNRKIAIYI
301: ISDSKYYSLF KQFCRPACYP DEHYIPTFLN MFHGSMNANR SVTWVDWSIG GPHPATYAAA NITEGFLQSI RKNETDCLYN EEPTSLCFLF ARKFSPSALA
401: PLMNLSSTVL GF
Arabidopsis Description
At1g10280 [Source:UniProtKB/TrEMBL;Acc:Q9SY70]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.