CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, plastid, vacuole, mitochondrion

Predictor Summary:

nucleus 1
plastid 2
golgi 2
extracellular 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, mitochondrion, plastid, vacuole
Any Predictor:	golgi, mitochondrion, nucleus, plastid, vacuole
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	mitochondrion
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG31955	Sorghum	golgi	64.91	40.95
EES02542	Sorghum	golgi	60.75	39.66
EES02543	Sorghum	golgi	57.74	38.54
EES03971	Sorghum	golgi	39.62	26.58
EER93518	Sorghum	golgi, plasma membrane, plastid	36.6	25.13
EER93516	Sorghum	golgi	35.85	25.0
EES14395	Sorghum	endoplasmic reticulum, golgi, plastid	37.74	24.27
EER93517	Sorghum	golgi, mitochondrion, plasma membrane	36.6	24.13
KXG24124	Sorghum	cytosol, golgi, plasma membrane, plastid	35.85	23.34
EES11719	Sorghum	golgi, mitochondrion, peroxisome	36.98	21.97
KXG20537	Sorghum	mitochondrion	29.06	20.37
EES04616	Sorghum	golgi	27.92	19.17
OQU84731	Sorghum	plastid	34.72	19.17
EES12818	Sorghum	golgi	27.92	19.12
KXG20769	Sorghum	golgi	26.79	19.09
KXG24737	Sorghum	golgi	27.17	18.8
KXG33181	Sorghum	golgi, mitochondrion, plastid	25.66	17.39
EES19116	Sorghum	golgi	24.91	17.32

Protein Annotations

MapMan:35.1	UniProt:A0A1W0VRS8	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008375
GO:GO:0016020	GO:GO:0016740	InterPro:Glyco_trans_14	ProteinID:OQU75987.1	EnsemblPlants:OQU75988	ProteinID:OQU75988
ProteinID:OQU75988.1	ProteinID:OQU75989.1	PFAM:PF02485	PANTHER:PTHR31042	PANTHER:PTHR31042:SF26	EnsemblPlantsGene:SORBI_3010G070400
TMHMM:TMhelix	UniParc:UPI0009DC910D	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:5640539..5655395

Molecular Weight (calculated)

29543.3 Da

IEP (calculated)

7.694

GRAVY (calculated)

-0.162

Length

265 amino acids

Sequence
(BLAST)

001: MNDTSMPIRP GVSSRRKESP LSMVVPMLLC FSLGFVLAIT SNAKFPNFYL PFLPPLPSAS VSSPSPPPLL FPPSPPPPAL QPPPPPPTPS TSLSSVKRNN
101: MTDEELFWLA SMSPKVRATP YHRVPKVAFL FLARGDLPLR PLWEKFFEGH DGLYSIYVHA DPSYTGSPPD DSVFYNRMIP SQNTSWGDVT LVDAARRLVA
201: NALLDVGNQR FALVSESCIP LYNFTTVYAL LTGSNTSFVD SFFNHHSDVR WHPYRHDDST PPYMF

Best Arabidopsis Sequence Match ( AT1G68380.1 )
(BLAST)

001: MPTQKDQNSP LSQVIELLKK LLHHFHNLLL YFFILWIGVI VGIIVYPSLQ GLSSPSSLTI QSVSQLFFVT PPPPILSPSF QDNGLDMFLI PLKNIMHDME
101: DNELLWRASM DPKIRDYPYP RIPKVAFMFL TWGPLPLAPL WERFFRGHEG LFTIYVHTNS SYDEFMPQDS VFYGRRIPSK RVDWGNANMV EAERRLLANA
201: LLDINNERFI LLSESCIPLF NFSTVYSFLI DSTLTHVDSY DLTIGRVRYD RRMYPHIRMH QWRKGSQWFE LDRAMALEVV SDTFYWPIFK AYSRCPDEHY
301: IPTLLNMRPS LGLRNANRTL TWTDWSKRRA HPRLFGEWEV NVEFLEWLRM KSVGDCKKNG ENKMRLCFLF ARKFSSTALD ELLRLASIVM YF

Arabidopsis Description

Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9M9C3]
SUBAcon: [golgi,plasma membrane,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.