CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 3
plasma membrane 1
mitochondrion 2
golgi 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d002382_P002	Maize	golgi, mitochondrion	94.06	94.06
HORVU2Hr1G100480.3	Barley	cytosol	68.22	81.23
TraesCS2D01G428700.2	Wheat	mitochondrion	78.04	79.47
TraesCS2B01G452200.4	Wheat	mitochondrion	77.78	79.21
TraesCS2A01G430900.2	Wheat	mitochondrion	77.78	77.98
KXG24737	Sorghum	golgi	73.64	74.41
EES04616	Sorghum	golgi	67.18	67.36
VIT_04s0008g02630.t01	Wine grape	golgi	66.41	65.73
KXG20769	Sorghum	golgi	61.76	64.25
KXG20537	Sorghum	mitochondrion	62.27	63.76
KRH19073	Soybean	golgi	64.34	63.36
PGSC0003DMT400073984	Potato	golgi	63.31	62.34
Solyc07g008940.2.1	Tomato	golgi	63.05	62.09
VIT_11s0103g00490.t01	Wine grape	golgi, plastid	63.31	60.79
Bra011262.1-P	Field mustard	golgi	58.91	60.64
CDX68738	Canola	golgi	58.91	60.64
AT4G31350.4	Thale cress	golgi	58.91	60.64
CDY28259	Canola	golgi	58.91	60.64
CDX89388	Canola	cytosol	35.14	59.65
KRH02808	Soybean	golgi	64.34	59.29
KRH16109	Soybean	mitochondrion	57.36	56.35
AT4G30060.1	Thale cress	golgi	57.88	55.86
KRH05009	Soybean	golgi, mitochondrion	56.85	55.84
AT5G57270.5	Thale cress	golgi	55.81	55.67
CDX88613	Canola	golgi	55.81	55.53
CDY11878	Canola	golgi	55.81	55.53
Bra010307.1-P	Field mustard	golgi, mitochondrion	57.36	55.36
Bra036729.1-P	Field mustard	mitochondrion	56.59	55.3
CDY38285	Canola	golgi	55.56	55.27
Bra002743.1-P	Field mustard	golgi	55.56	55.27
CDY03361	Canola	mitochondrion	56.33	55.19
CDY66853	Canola	mitochondrion	56.33	55.05
CDY25922	Canola	golgi	55.3	55.01
CDY03552	Canola	golgi, mitochondrion	56.85	54.86
CDY49466	Canola	cytosol	36.18	54.47
Bra013927.1-P	Field mustard	golgi, plastid	51.16	54.1
AT2G19160.1	Thale cress	golgi, mitochondrion	55.04	54.06
CDX94406	Canola	golgi	52.45	53.56
CDY12850	Canola	mitochondrion	55.04	53.52
CDX83505	Canola	mitochondrion	55.04	53.52
CDY30178	Canola	mitochondrion	55.56	53.48
CDY51089	Canola	golgi, mitochondrion	54.52	53.42
CDY01412	Canola	mitochondrion	55.04	53.38
Bra012167.1-P	Field mustard	mitochondrion	55.04	53.38
CDX82625	Canola	mitochondrion	54.26	53.16
CDY46724	Canola	mitochondrion	55.3	53.1
Bra024111.1-P	Field mustard	mitochondrion	51.42	53.07
Bra038843.1-P	Field mustard	mitochondrion	54.52	53.02
CDX92736	Canola	mitochondrion	51.68	52.77
AT4G25870.1	Thale cress	cytosol, golgi, mitochondrion, plastid	52.71	52.44
CDY42774	Canola	mitochondrion	51.16	52.24
Bra010446.1-P	Field mustard	mitochondrion	49.87	49.61
Bra019138.1-P	Field mustard	plastid	49.1	48.72
CDY66012	Canola	mitochondrion	45.48	48.22
CDY57290	Canola	cytosol	40.57	45.38
CDY14193	Canola	mitochondrion	57.11	42.18
EER93518	Sorghum	golgi, plasma membrane, plastid	38.24	38.34
EER93516	Sorghum	golgi	35.66	36.32
EER93517	Sorghum	golgi, mitochondrion, plasma membrane	36.69	35.32
KXG24124	Sorghum	cytosol, golgi, plasma membrane, plastid	35.92	34.15
EES03971	Sorghum	golgi	34.63	33.92
EES14395	Sorghum	endoplasmic reticulum, golgi, plastid	33.85	31.8
EES02542	Sorghum	golgi	33.07	31.53
EES19116	Sorghum	golgi	30.75	31.23
EES02543	Sorghum	golgi	31.52	30.73
EES11719	Sorghum	golgi, mitochondrion, peroxisome	35.4	30.72
KXG31955	Sorghum	golgi	32.56	30.0
KXG33181	Sorghum	golgi, mitochondrion, plastid	29.97	29.67
OQU75988	Sorghum	golgi, mitochondrion, plastid, vacuole	19.12	27.92
OQU84731	Sorghum	plastid	33.59	27.08

Protein Annotations

EnsemblPlants:EES12818	EnsemblPlantsGene:SORBI_3006G207900	EntrezGene:8072307	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008375	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042
PANTHER:PTHR31042:SF13	PFAM:PF02485	ProteinID:EES12818	ProteinID:EES12818.1	RefSeq:XP_002448490.1	SEG:seg
TMHMM:TMhelix	unigene:Sbi.7971	UniParc:UPI0001A87539	UniProt:C5YFJ9	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr6:-:55742649..55747026

Molecular Weight (calculated)

45127.2 Da

IEP (calculated)

8.861

GRAVY (calculated)

-0.356

Length

387 amino acids

Sequence
(BLAST)

001: MKLHQVWQFG VKDMKAVPLP RPRAAPKRRA WILGVATFIF IALAWAYLYP PPHYTSPVRD WLPGRLPAEP ARELTDEERA SRVVFRQILT TPAVRSKNSK
101: IAFMFLTPGT LPFERLWEKF FEGHEGRYTI YIHASREKPE HVSPIFVGRE IHSEKVTWGK ISMVDAERRL LANALQDIDN QHFVLLSDSC VPLHNFDYVY
201: DYLMGANLSF IDCFYDPGPH GNFRYSQNML PEVTETDFRK GSQWFSVKRQ HALMIIADSL YYTKFKLHCR PGMEDGRNCY ADEHYLPTVF HMMDPDGIAN
301: WSVTHVDWSE GKWHPKAYRA KDVTFELLKN ITSIDMNHHV TSDSKKVVTE KPCLWNGAKR PCYLFARKFY PESINNLLTL FANYTLI

Best Arabidopsis Sequence Match ( AT4G31350.2 )
(BLAST)

001: MSESRQRPPF KGPRWIITLV VLVTVVVITA FIYPPRNSVA CYMFSGPGCP LYQQFLFVPT RELTDSEAAA QVVMNEIMNL PQSKTANPKL AFMFLTPGTL
101: PFEPLWEMFF RGHENKFSVY VHASKKSPVH TSSYFVGRDI HSHKVAWGQI SMVDAERRLL AHALVDPDNQ HFILLSDSCV PLFDFNYIYN HLIFANLSFI
201: DCFEDPGPHG SGRYSQHMLP EVEKKDFRKG SQWFSMKRRH AIVVMADSLY YTKFKLYCRP NMEGRNCYAD EHYFPTLFNM IDPDGIANWS VTHVDWSEGK
301: WHPKLYNARD ITPYLIRKIK SIQLAYHVTS DLKKVTTVKP CLWKGEQRPC YLFARKFNPE TLDRLMYLFP NYTSLV

Arabidopsis Description

At4g31350 [Source:UniProtKB/TrEMBL;Acc:Q8GS18]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.