Factsheet for Bra010446.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
golgi 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY66012	Canola	mitochondrion	93.83	100.0
Bra013927.1-P	Field mustard	golgi, plastid	78.41	83.33
AT4G25870.1	Thale cress	cytosol, golgi, mitochondrion, plastid	81.75	81.75
Bra019138.1-P	Field mustard	plastid	75.06	74.87
Bra002743.1-P	Field mustard	golgi	69.15	69.15
Bra010307.1-P	Field mustard	golgi, mitochondrion	57.84	56.11
Bra036729.1-P	Field mustard	mitochondrion	55.27	54.29
Bra012167.1-P	Field mustard	mitochondrion	55.27	53.88
Bra024111.1-P	Field mustard	mitochondrion	51.93	53.87
Solyc07g008940.2.1	Tomato	golgi	53.98	53.44
PGSC0003DMT400073984	Potato	golgi	53.73	53.18
KRH19073	Soybean	golgi	53.47	52.93
HORVU2Hr1G100480.3	Barley	cytosol	44.22	52.92
VIT_11s0103g00490.t01	Wine grape	golgi, plastid	54.5	52.61
Bra038843.1-P	Field mustard	mitochondrion	52.96	51.76
Zm00001d026261_P001	Maize	golgi, mitochondrion	50.39	51.17
Zm00001d024348_P002	Maize	mitochondrion	47.81	50.27
EES12818	Sorghum	golgi	49.61	49.87
Bra011262.1-P	Field mustard	golgi	48.07	49.73
KRH02808	Soybean	golgi	53.47	49.52
KXG24737	Sorghum	golgi	48.33	49.09
Zm00001d002382_P002	Maize	golgi, mitochondrion	48.33	48.58
TraesCS2D01G428700.2	Wheat	mitochondrion	46.27	47.37
TraesCS2B01G452200.4	Wheat	mitochondrion	45.76	46.84
TraesCS2A01G430900.2	Wheat	mitochondrion	45.5	45.85
Os08t0225400-01	Rice	cytosol, golgi	48.07	45.28
Bra015963.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	32.65	36.29
Bra006342.1-P	Field mustard	cytosol	31.88	35.73
Bra006113.1-P	Field mustard	golgi	33.93	34.2
Bra031273.1-P	Field mustard	golgi	33.42	34.12
Bra008941.1-P	Field mustard	golgi	33.68	33.94
Bra019894.1-P	Field mustard	golgi	32.39	33.42
Bra009874.1-P	Field mustard	golgi	33.16	33.42
Bra006114.1-P	Field mustard	golgi	30.59	33.24
Bra030418.1-P	Field mustard	golgi	32.39	32.39
Bra004303.1-P	Field mustard	golgi, vacuole	33.16	31.01
Bra018450.1-P	Field mustard	golgi	32.13	30.94
Bra019951.1-P	Field mustard	endoplasmic reticulum, golgi, plastid	32.65	30.68
Bra004302.1-P	Field mustard	golgi	30.33	29.8
Bra008639.1-P	Field mustard	golgi	30.85	29.63
Bra008752.1-P	Field mustard	mitochondrion	27.76	29.51
Bra033941.1-P	Field mustard	golgi	30.85	29.27
Bra034487.1-P	Field mustard	mitochondrion	27.76	28.95
Bra016802.1-P	Field mustard	golgi	26.22	27.13
Bra031797.1-P	Field mustard	cytosol	23.14	26.63

Protein Annotations

EnsemblPlants:Bra010446.1	EnsemblPlants:Bra010446.1-P	EnsemblPlantsGene:Bra010446	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008375	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042
PANTHER:PTHR31042:SF1	PFAM:PF02485	SEG:seg	TMHMM:TMhelix	UniParc:UPI000254586D	UniProt:M4D1U6
MapMan:35.1	:	:	:	:	:

Description

AT4G25870 (E=1e-190) | unknown protein

Coordinates

chrA08:+:14572999..14574901

Molecular Weight (calculated)

44969.9 Da

IEP (calculated)

8.473

GRAVY (calculated)

-0.312

Length

389 amino acids

Sequence
(BLAST)

001: MSYKEQKYLQ RPRHHTSLKK PLCVVLTVSV ISMLLVCTHL FPRHGKSSSC HGLSSSRGCE NAISALLPAH IRKLTIKEIA ARAVVRDILR TPSLVTQNSK
101: IAFLFLTHAT LPFEELWDEF FKGHEGKFSI YIYTFKERPV HISPHFYDRE IHSDKVTWGR TSMVDAEKRL LVNALEDPEN QHFVLLSESC IPLHTFDYTY
201: RYLLYSNVSF IESFVDPGPH GTGRHMEHML PEITKEDFRK GAQWFTMKRQ HAVIVMADSL YHSKFSKYCG PGLEANKSCT ADEHYLPTFF SKVDPMGISN
301: WSVTYVDWSK RRRHPKTYRA HEISLEFMNS VSSEEMSVHV TSLGEHGELH WPCTWNGITR PCYLFARKFH PDALDTLVNL FPNYTSPVV

Best Arabidopsis Sequence Match ( AT4G25870.1 )
(BLAST)

001: MGETQKILQG PRHHTSLKKP LWVVLTVSVT SMLLICTHMY PKHGKSSSCH GLYSTRGCED ALSKWLPVHV RKFTDEEIAA RAVVRDILRT PPFITNNSKI
101: AFLFLTPGTL PFEKLWDEFF KGHEGKFSIY IHPSKERPVH ISRHFSDREI HSDEVTWGRI SMVDAEKRLL VSALEDPDNQ HFVLVSESCI PLHTFDYTYR
201: YLLYSNVSFI ESFVDPGPHG TGRHMEHMLP EIAKEDFRKG AQWFTMKRQH AIIVMADGLY YSKFREYCGP GIEADKNCIA DEHYLPTFFN MIDPMGISNW
301: SVTFVDWSER RWHPKTYGGN EISLEFMKNV TSEDMSVHVT SVGKHGDELH WPCTWNGIKR PCYLFARKFH PDTLDTLVNL FPNYTNTAV

Arabidopsis Description

At4g25870 [Source:UniProtKB/TrEMBL;Acc:Q9SVZ8]
SUBAcon: [mitochondrion,golgi,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.