Factsheet for Bra006113.1-P

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

nucleus 1
mitochondrion 1
golgi 3
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78439	Canola	golgi	96.63	93.02
AT5G11730.1	Thale cress	golgi	85.75	85.75
Bra006114.1-P	Field mustard	golgi	79.27	85.47
Bra008941.1-P	Field mustard	golgi	82.9	82.9
Bra009874.1-P	Field mustard	golgi	70.47	70.47
EER93518	Sorghum	golgi, plasma membrane, plastid	58.81	58.81
GSMUA_Achr1P14240_001	Banana	golgi	54.4	58.66
TraesCS4A01G253400.1	Wheat	golgi, plasma membrane, plastid	58.29	57.54
Zm00001d033892_P001	Maize	endoplasmic reticulum, golgi, plasma membrane	54.4	57.53
TraesCS4D01G061000.1	Wheat	golgi, plasma membrane, plastid	58.03	57.14
GSMUA_Achr3P25730_001	Banana	golgi	53.11	57.1
TraesCS4B01G062000.1	Wheat	golgi, plasma membrane, plastid	57.77	56.89
HORVU4Hr1G010270.2	Barley	golgi, peroxisome	57.77	55.75
EER93517	Sorghum	golgi, mitochondrion, plasma membrane	57.77	55.47
EER93516	Sorghum	golgi	54.4	55.26
Bra031273.1-P	Field mustard	golgi	54.4	55.12
Bra030418.1-P	Field mustard	golgi	55.18	54.76
Zm00001d033891_P001	Maize	cytosol, golgi, plasma membrane	56.74	54.34
Zm00001d033890_P001	Maize	golgi	57.77	52.97
Os03t0731050-00	Rice	plastid	57.25	51.64
Bra006342.1-P	Field mustard	cytosol	43.52	48.41
Bra015963.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	41.97	46.29
Bra019894.1-P	Field mustard	golgi	44.82	45.89
Bra018450.1-P	Field mustard	golgi	46.11	44.06
Bra008639.1-P	Field mustard	golgi	45.6	43.46
Bra019951.1-P	Field mustard	endoplasmic reticulum, golgi, plastid	46.37	43.24
Bra004303.1-P	Field mustard	golgi, vacuole	46.37	43.03
Bra033941.1-P	Field mustard	golgi	45.6	42.93
Bra004302.1-P	Field mustard	golgi	42.75	41.67
Bra013927.1-P	Field mustard	golgi, plastid	36.27	38.25
Bra011262.1-P	Field mustard	golgi	34.72	35.64
Bra002743.1-P	Field mustard	golgi	35.23	34.96
Bra036729.1-P	Field mustard	mitochondrion	34.97	34.09
Bra010446.1-P	Field mustard	mitochondrion	34.2	33.93
Bra019138.1-P	Field mustard	plastid	34.2	33.85
Bra012167.1-P	Field mustard	mitochondrion	34.97	33.83
Bra010307.1-P	Field mustard	golgi, mitochondrion	34.72	33.42
Bra024111.1-P	Field mustard	mitochondrion	31.87	32.8
Bra038843.1-P	Field mustard	mitochondrion	32.64	31.66
Bra034487.1-P	Field mustard	mitochondrion	30.31	31.37
Bra008752.1-P	Field mustard	mitochondrion	29.53	31.15
Bra031797.1-P	Field mustard	cytosol	26.17	29.88
Bra016802.1-P	Field mustard	golgi	28.24	28.99

Protein Annotations

EnsemblPlants:Bra006113.1	EnsemblPlants:Bra006113.1-P	EnsemblPlantsGene:Bra006113	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008375	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042
PANTHER:PTHR31042:SF54	PFAM:PF02485	SEG:seg	TMHMM:TMhelix	UniParc:UPI000253F960	UniProt:M4CPH5
MapMan:35.1	:	:	:	:	:

Description

AT5G11730 (E=9e-184) | unknown protein

Coordinates

chrA03:+:2076331..2077727

Molecular Weight (calculated)

44218.5 Da

IEP (calculated)

9.368

GRAVY (calculated)

-0.202

Length

386 amino acids

Sequence
(BLAST)

001: MQTISRVLQE GKENGILVRT GQYKSFRPKL LLLLGLFLAV VVTIFIISVS TINSTELQSV VTTVTSTFVP CREDEPNSLG KWIQPPTVLM HNMSDEELLW
101: RASLWPRRKG YPFKRVPKIA FMFLTKGPLP LASLWERFLK GHKGLYSVYV HPDPSFNAKF PADSVFYKRQ IPSQVAEWGR MTMCDAEKRL LANALLDISN
201: EWFVLVSESC IPLYNFTTIY TYLSQSKHSF IGAVDDPGPF GRGRYNEKME PEVPITKWRK GPQWFEVGRD LAATIVRDTL YHQKFREFCR PACYSDEHYF
301: PTMLTIEKPT ALANRSVTWT DWSRGGPHPA TFGRSDITEE FFGKIFDGTN CSYNGRNTSM CYLFARKFAP SALEPLLHIA PKIMGF

Best Arabidopsis Sequence Match ( AT5G11730.1 )
(BLAST)

001: MQNRIVQLEE GKENGITVRS GHYKGFPSKL LLLLGLFLTF SVTVFIISVS TIKYTGIQSV VTTVTSSFVP CREGEPNSLS KWIQPPAVLM HNMSDEELLW
101: RASFWPRRKE YPFKRVPKVA FMFLTKGPLP LASLWERFLK GHKGLYSVYL HPHPSFTAKF PASSVFHRRQ IPSQVAEWGR MSMCDAEKRL LANALLDVSN
201: EWFVLVSESC IPLYNFTTIY SYLSRSKHSF MGAFDDPGPF GRGRYNGNME PEVPLTKWRK GSQWFEVNRD LAATIVKDTL YYPKFKEFCR PACYVDEHYF
301: PTMLTIEKPT VLANRSLTWV DWSRGGPHPA TFGRSDITEN FFGKIFDGRN CSYNGRNTSM CYLFARKFAP SALEPLLHIA PKILGF

Arabidopsis Description

At5g11730 [Source:UniProtKB/TrEMBL;Acc:Q9LYF7]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.