Factsheet for Bra018450.1-P

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

nucleus 1
golgi 4
plastid 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	golgi
Plant-mPloc:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31036	Canola	golgi	93.32	100.0
Bra019951.1-P	Field mustard	endoplasmic reticulum, golgi, plastid	90.35	88.16
AT1G10280.1	Thale cress	golgi	87.87	86.17
GSMUA_Achr7P23520_001	Banana	cytosol	52.23	71.53
GSMUA_Achr8P29190_001	Banana	cytosol	43.56	64.47
VIT_12s0035g01710.t01	Wine grape	golgi	60.15	64.12
KRH06031	Soybean	golgi, plasma membrane, plastid	60.89	62.44
KRH26270	Soybean	golgi	58.91	62.14
PGSC0003DMT400063986	Potato	golgi	59.16	60.2
Solyc01g103150.2.1	Tomato	golgi	58.91	59.95
GSMUA_Achr5P01370_001	Banana	golgi	52.97	58.47
GSMUA_Achr8P08460_001	Banana	golgi	51.73	57.58
TraesCS7D01G317600.1	Wheat	cytosol, golgi, peroxisome	55.45	55.31
Os08t0110400-01	Rice	cytosol, golgi, peroxisome	55.69	55.28
TraesCS7A01G320800.1	Wheat	cytosol, golgi, peroxisome	55.2	55.06
GSMUA_Achr8P32350_001	Banana	golgi, mitochondrion	54.21	55.03
TraesCS7B01G221700.1	Wheat	cytosol, golgi, peroxisome	54.95	54.81
EES14395	Sorghum	endoplasmic reticulum, golgi, plastid	54.95	53.88
HORVU7Hr1G076790.5	Barley	golgi	54.46	53.79
Zm00001d035039_P001	Maize	plasma membrane	54.7	53.38
Os04t0272400-01	Rice	golgi, nucleus, peroxisome	52.72	51.7
TraesCS2D01G566600.1	Wheat	cytosol, golgi, plasma membrane	51.98	50.48
TraesCS2B01G616400.1	Wheat	golgi	52.23	50.48
HORVU2Hr1G127680.1	Barley	cytosol, golgi, plasma membrane	50.99	49.4
TraesCSU01G137600.1	Wheat	cytosol, golgi, plasma membrane	51.98	49.18
Bra031273.1-P	Field mustard	golgi	45.3	48.03
Zm00001d026711_P001	Maize	cytosol, golgi, plasma membrane	50.49	46.68
EES11719	Sorghum	golgi, mitochondrion, peroxisome	51.49	46.64
Bra006113.1-P	Field mustard	golgi	44.06	46.11
Bra009874.1-P	Field mustard	golgi	43.81	45.85
Bra006342.1-P	Field mustard	cytosol	39.36	45.82
Bra006114.1-P	Field mustard	golgi	40.59	45.81
Bra030418.1-P	Field mustard	golgi	44.06	45.76
Bra008941.1-P	Field mustard	golgi	43.56	45.6
Bra004303.1-P	Field mustard	golgi, vacuole	45.54	44.23
Bra019894.1-P	Field mustard	golgi	41.09	44.03
Bra015963.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	37.87	43.71
Bra033941.1-P	Field mustard	golgi	44.31	43.66
Bra004302.1-P	Field mustard	golgi	42.08	42.93
Bra008639.1-P	Field mustard	golgi	41.58	41.48
Bra011262.1-P	Field mustard	golgi	33.91	36.44
Bra013927.1-P	Field mustard	golgi, plastid	31.19	34.43
Bra038843.1-P	Field mustard	mitochondrion	31.93	32.41
Bra024111.1-P	Field mustard	mitochondrion	29.95	32.27
Bra034487.1-P	Field mustard	mitochondrion	29.7	32.17
Bra010307.1-P	Field mustard	golgi, mitochondrion	31.93	32.17
Bra002743.1-P	Field mustard	golgi	30.94	32.13
Bra010446.1-P	Field mustard	mitochondrion	30.94	32.13
Bra016802.1-P	Field mustard	golgi	29.46	31.65
Bra036729.1-P	Field mustard	mitochondrion	30.94	31.57
Bra008752.1-P	Field mustard	mitochondrion	28.47	31.42
Bra031797.1-P	Field mustard	cytosol	25.99	31.07
Bra012167.1-P	Field mustard	mitochondrion	30.45	30.83
Bra019138.1-P	Field mustard	plastid	29.21	30.26

Protein Annotations

EnsemblPlants:Bra018450.1	EnsemblPlants:Bra018450.1-P	EnsemblPlantsGene:Bra018450	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008375	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042
PANTHER:PTHR31042:SF3	PFAM:PF02485	SEG:seg	TMHMM:TMhelix	UniParc:UPI0002547F4B	UniProt:M4DPK9
MapMan:35.1	:	:	:	:	:

Description

AT1G10280 (E=3e-211) | unknown protein

Coordinates

chrA05:+:8279552..8281610

Molecular Weight (calculated)

46227.1 Da

IEP (calculated)

7.258

GRAVY (calculated)

-0.272

Length

404 amino acids

Sequence
(BLAST)

001: MARGRAGEKE EHIGLLKLAQ TLSFLLIFMA GIIIGLAASS HIDRYFNSLP QMLSSSASVQ TVPDYSNCTV IHRDCSNDDD DVKAAKKKDE IRDCWSVDGF
101: VRPEEVRHGM SDDELFWRAS MVPVKEEYPY DRVPKVAFMF LTRGALPMLP LWEKFFRGNE KFLSVYVHTP PGYDMNVSSD SPFYNRQVPS QKVAWGSPLL
201: TDAEKRLLAN ALLDFSNERF VLLSESCVPV YNFTTVYSYL INSAYSFVDS YDEPTRYGRG RYSRKMLPDI KLHHWRKGSQ WFEVNRKIAI YIISDSKYYS
301: LFKKFCRPAC YPDEHYIPTL LNMFHGSVNA NRSVTWVDWS IGGPHPATYG ADNITEGFLQ SIRKNDTDCL YNEEPTSLCF LFARKFAPSA LAPLMNLSST
401: VMGF

Best Arabidopsis Sequence Match ( AT1G10280.1 )
(BLAST)

001: MARGGKEEGE KHIGLLKLAQ TLSFLLIFMA GIIIGLAASS HIDRYFNSLP RMFSSTTNLQ SIPFSTPDYS NCTIIHRDCT GNDDNESDDG GVKAEKPKVR
101: DCWSIDGFVR PENLSHGMTD DELFWRASMV PVKEEYPYDR VPKVAFMFLT RGPLPMLPLW EKFFKGNEKY LSVYVHTPPG YDMNVSRDSP FYDRQIPSQR
201: VEWGSPLLTD AEKRLLANAL LDFSNERFVL LSESCVPVYN FSTVYTYLIN SAYSFVDSYD EPTRYGRGRY SRKMLPDIKL HHWRKGSQWF EVNRKIAIYI
301: ISDSKYYSLF KQFCRPACYP DEHYIPTFLN MFHGSMNANR SVTWVDWSIG GPHPATYAAA NITEGFLQSI RKNETDCLYN EEPTSLCFLF ARKFSPSALA
401: PLMNLSSTVL GF

Arabidopsis Description

At1g10280 [Source:UniProtKB/TrEMBL;Acc:Q9SY70]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.