Factsheet for Bra019894.1-P

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 2
golgi 3
nucleus 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
MultiLoc:	golgi
Plant-mPloc:	nucleus, plastid
Predotar:	mitochondrion
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY19328	Canola	golgi, mitochondrion	95.76	95.5
AT1G10880.1	Thale cress	golgi	89.12	87.05
VIT_01s0011g03840.t01	Wine grape	cytosol	51.19	65.2
GSMUA_Achr8P31730_001	Banana	cytosol	42.71	58.76
Solyc05g009130.2.1	Tomato	golgi	51.72	52.0
Bra006342.1-P	Field mustard	cytosol	45.89	49.86
Bra006113.1-P	Field mustard	golgi	45.89	44.82
Bra008941.1-P	Field mustard	golgi	45.36	44.3
Bra008639.1-P	Field mustard	golgi	47.48	44.2
Bra006114.1-P	Field mustard	golgi	41.91	44.13
Bra009874.1-P	Field mustard	golgi	44.3	43.26
Bra033941.1-P	Field mustard	golgi	46.95	43.17
Bra015963.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	40.05	43.14
Bra031273.1-P	Field mustard	golgi	42.44	41.99
Bra004303.1-P	Field mustard	golgi, vacuole	45.89	41.59
Bra018450.1-P	Field mustard	golgi	44.03	41.09
Bra030418.1-P	Field mustard	golgi	42.18	40.87
Bra004302.1-P	Field mustard	golgi	42.18	40.15
Bra019951.1-P	Field mustard	endoplasmic reticulum, golgi, plastid	43.77	39.86
Bra011262.1-P	Field mustard	golgi	37.67	37.77
Bra013927.1-P	Field mustard	golgi, plastid	33.95	34.97
Bra002743.1-P	Field mustard	golgi	34.48	33.42
Bra036729.1-P	Field mustard	mitochondrion	34.48	32.83
Bra010446.1-P	Field mustard	mitochondrion	33.42	32.39
Bra012167.1-P	Field mustard	mitochondrion	34.22	32.33
Bra038843.1-P	Field mustard	mitochondrion	33.95	32.16
Bra019138.1-P	Field mustard	plastid	33.16	32.05
Bra010307.1-P	Field mustard	golgi, mitochondrion	33.69	31.67
Bra024111.1-P	Field mustard	mitochondrion	30.77	30.93
Bra008752.1-P	Field mustard	mitochondrion	29.97	30.87
Bra034487.1-P	Field mustard	mitochondrion	30.24	30.56
Bra016802.1-P	Field mustard	golgi	29.97	30.05
Bra031797.1-P	Field mustard	cytosol	25.46	28.4

Protein Annotations

EnsemblPlants:Bra019894.1	EnsemblPlants:Bra019894.1-P	EnsemblPlantsGene:Bra019894	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008375	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042
PANTHER:PTHR31042:SF17	PFAM:PF02485	SEG:seg	TMHMM:TMhelix	UniParc:UPI000253EAA0	UniProt:M4DTQ1
MapMan:35.1	:	:	:	:	:

Description

AT1G10880 (E=2e-165) | unknown protein

Coordinates

chrA06:-:3832420..3833635

Molecular Weight (calculated)

43838.0 Da

IEP (calculated)

9.675

GRAVY (calculated)

-0.274

Length

377 amino acids

Sequence
(BLAST)

001: MKKQKFTAFV KELNVRMKKE PITLRYIHIL GTVVFFTSIS SLVILLALYL NQRLQTSLFL QNDHLSSNPL TSPSLSPPPP HGSDMSDEEL MRRAAMAPRE
101: AVINETHPKV AFMFLTRWNL PLSPLWEIFF KGHEDFYSIY VHTSPEFTEE PPESSVFYKK RIPSKTVEWG RSSMMDAERR LLSHALLKPS NARFVLLSET
201: CIPLFNFTTV YTYLMGSTRS FLGSFDDPRP MGRGRYNPKM LPHVSLSDWR KGNQWFELSR RVAAEIISDH RYYNVFKDHC RPPCYIDEHY IPTLVNKICP
301: EMNSNRTVTW VDWSRGGSHP ARFVRKDIRV GFLDRIRFGS NCSYEGEVTN VCFLFARKFH VSTLEPLVKI APYLYGI

Best Arabidopsis Sequence Match ( AT1G10880.1 )
(BLAST)

001: MKKQKITTFV KELNLRMNSK KEPISLRYIH ILGTVVFFSS VSSLVILLAF YLNQRLQTSL FLVEDYHTLS SNPLTSPSLS PPPSPSPRSS GSNIADEELM
101: WRAAMAPRSP MKNETHPKVA FMFLTRWNLP LSPLWEMFFK GHEGFYSIYV HTSPEFTQEP PESSVFYKKR IPSKAVEWGK CSMMDAEKRL ISHALLEPSN
201: ARFVLLSETC IPLFNFTTIY TYLTRSTRSF LGSFDDPRPM GRGRYTPKML PHVSLSDWRK GNQWFEISRR VAAEIVSDRR YYAVFKDHCR PPCYIDEHYL
301: PTLVNKICPE MNSNRTVTWV DWSRGGSHPA RFVRKDIRVG FLDRIRFGSN CSYEGEVTNV CFLFGRKFHV STLEPLMKIA PYLFGI

Arabidopsis Description

Core-2/I-branching beta-1,6-n-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q0WR07]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.