Factsheet for Bra016802.1-P

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 2
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 5
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY21023	Canola	golgi	98.94	98.94
CDY31228	Canola	golgi	96.28	97.84
AT1G11940.1	Thale cress	golgi	85.11	83.55
Bra031797.1-P	Field mustard	cytosol	61.97	68.93
Bra034487.1-P	Field mustard	mitochondrion	68.09	68.63
VIT_10s0116g00980.t01	Wine grape	golgi	61.97	61.32
Solyc02g036250.1.1	Tomato	cytosol	24.73	59.24
KRH11480	Soybean	mitochondrion	56.38	56.23
PGSC0003DMT400042390	Potato	golgi	55.85	56.0
PGSC0003DMT400055283	Potato	golgi	54.26	54.84
Solyc02g080970.2.1	Tomato	plastid	56.38	54.22
HORVU3Hr1G065000.4	Barley	cytosol	44.95	52.32
KRH36494	Soybean	mitochondrion	55.59	49.64
GSMUA_Achr3P28930_001	Banana	golgi	50.27	49.35
Os01t0695200-01	Rice	plastid	47.61	49.31
TraesCS3A01G258700.1	Wheat	golgi, mitochondrion, plastid	51.33	49.11
GSMUA_Achr9P21910_001	Banana	golgi	50.27	48.96
TraesCS3D01G258800.1	Wheat	golgi, mitochondrion, plastid	51.06	48.73
KXG33181	Sorghum	golgi, mitochondrion, plastid	49.2	47.31
Zm00001d043768_P001	Maize	golgi, mitochondrion, plastid	49.2	47.31
TraesCS3B01G291600.1	Wheat	plastid	51.6	46.86
Bra008752.1-P	Field mustard	mitochondrion	44.68	45.9
Bra006342.1-P	Field mustard	cytosol	30.32	32.85
Bra015963.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	29.26	31.43
Bra031273.1-P	Field mustard	golgi	31.12	30.71
Bra030418.1-P	Field mustard	golgi	31.38	30.33
Bra011262.1-P	Field mustard	golgi	30.05	30.05
Bra019894.1-P	Field mustard	golgi	30.05	29.97
Bra038843.1-P	Field mustard	mitochondrion	31.65	29.9
Bra012167.1-P	Field mustard	mitochondrion	31.65	29.82
Bra036729.1-P	Field mustard	mitochondrion	31.12	29.55
Bra009874.1-P	Field mustard	golgi	30.32	29.53
Bra018450.1-P	Field mustard	golgi	31.65	29.46
Bra008941.1-P	Field mustard	golgi	30.05	29.27
Bra004302.1-P	Field mustard	golgi	30.32	28.79
Bra006114.1-P	Field mustard	golgi	27.13	28.49
Bra019951.1-P	Field mustard	endoplasmic reticulum, golgi, plastid	31.12	28.26
Bra006113.1-P	Field mustard	golgi	28.99	28.24
Bra010307.1-P	Field mustard	golgi, mitochondrion	29.79	27.93
Bra013927.1-P	Field mustard	golgi, plastid	27.13	27.87
Bra033941.1-P	Field mustard	golgi	30.32	27.8
Bra002743.1-P	Field mustard	golgi	28.72	27.76
Bra004303.1-P	Field mustard	golgi, vacuole	30.59	27.64
Bra024111.1-P	Field mustard	mitochondrion	27.39	27.47
Bra008639.1-P	Field mustard	golgi	29.52	27.41
Bra010446.1-P	Field mustard	mitochondrion	27.13	26.22
Bra019138.1-P	Field mustard	plastid	26.86	25.9

Protein Annotations

EnsemblPlants:Bra016802.1	EnsemblPlants:Bra016802.1-P	EnsemblPlantsGene:Bra016802	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008375	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042
PANTHER:PTHR31042:SF2	PFAM:PF02485	SEG:seg	TMHMM:TMhelix	UniParc:UPI0002546222	UniProt:M4DJX4
MapMan:35.1	:	:	:	:	:

Description

AT1G11940 (E=5e-184) | unknown protein

Coordinates

chrA08:+:20055492..20057888

Molecular Weight (calculated)

43634.4 Da

IEP (calculated)

9.438

GRAVY (calculated)

-0.223

Length

376 amino acids

Sequence
(BLAST)

001: MTRKPASRRG VVWLGWKLVI AFSVCLCLLA LLRIQLQYRS VATLTPPLSV AGNEIALRDY YSGDRPKVAF LFLARRDLPL DFLWDSFFKG VDQANYSVYV
101: HSVPGFVFNE ETTRSEYFYN RQLNNSIKVI WGESSMIAAE RLLFASALED HSNQRFVLLS DRCAPLYDFG YIYRYIISSP RSFVDSFLHT KETRYSVNMS
201: SVIPEEKWRK GSQWISVIRS HAEVIVNDGI VFPVFKKFCK RAPPLGSQEA WLFFRQNRRN CIPDEHYVQT LLTMRGLESE MERRTLTYTV WNVSGSKYET
301: QTWHPVTFTF ENSGPGQIKE IKKIDHVYYE TESRTEWCKA DSKPVPCFLF ARKFTEGAAM RLVREGLIGS SKNITL

Best Arabidopsis Sequence Match ( AT1G11940.1 )
(BLAST)

001: MTKKSQPQIP PPLSRRGGVV WLGWKLVIAF SVALCLLALL RIQLQYNSFT TLSFPLSVAR SQTPLHKYSG DRPKLAFLFL ARRDLPLDFM WDRFFKGVDH
101: ANFSIYIHSV PGFVFNEETT RSQYFYNRQL NNSIKVVWGE SSMIEAERLL LASALEDHSN QRFVLLSDRC APLYDFGYIY KYLISSPRSF VDSFLHTKET
201: RYSVKMSPVI PEEKWRKGSQ WIALIRSHAE VIVNDGIVFP VFKEFCKRCP PLGTNEAWLF LKQKRRNCIP DEHYVQTLLT MQGLESEMER RTVTYTVWNV
301: SGTKYEAKSW HPVTFTLENS GPEEIKEIKK IDHVYYESES RTEWCKADSK PVPCFLFARK FTNEAAMRIV SEGLIGSSAN KTL

Arabidopsis Description

Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q8GYH0]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.