Factsheet for Bra031273.1-P

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

nucleus 1
golgi 3
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	golgi
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY51451	Canola	golgi	98.95	98.95
AT3G21310.1	Thale cress	golgi	82.41	81.98
Bra030418.1-P	Field mustard	golgi	74.02	72.49
VIT_09s0002g02660.t01	Wine grape	cytosol	52.23	67.69
KRH48972	Soybean	cytosol	37.27	66.67
KRH13326	Soybean	cytosol	36.22	64.79
KRH47176	Soybean	cytosol, golgi, plasma membrane	62.99	62.02
KRH44223	Soybean	cytosol, golgi, plasma membrane	62.2	61.24
Solyc03g121280.2.1	Tomato	golgi, nucleus, plasma membrane	60.63	60.0
PGSC0003DMT400006434	Potato	golgi, nucleus, plasma membrane	59.84	59.07
EER93518	Sorghum	golgi, plasma membrane, plastid	59.58	58.81
Zm00001d033892_P001	Maize	endoplasmic reticulum, golgi, plasma membrane	55.38	57.81
Bra008941.1-P	Field mustard	golgi	58.53	57.77
GSMUA_Achr1P14240_001	Banana	golgi	53.54	56.98
EER93516	Sorghum	golgi	56.17	56.32
PGSC0003DMT400012489	Potato	golgi	55.12	56.3
Solyc06g062490.2.1	Tomato	golgi	54.59	56.22
TraesCS4D01G061000.1	Wheat	golgi, plasma membrane, plastid	57.48	55.87
TraesCS4A01G253400.1	Wheat	golgi, plasma membrane, plastid	57.22	55.75
GSMUA_Achr3P25730_001	Banana	golgi	52.49	55.71
TraesCS4B01G062000.1	Wheat	golgi, plasma membrane, plastid	57.22	55.61
Bra006114.1-P	Field mustard	golgi	51.44	54.75
EER93517	Sorghum	golgi, mitochondrion, plasma membrane	57.48	54.48
Bra006113.1-P	Field mustard	golgi	55.12	54.4
Bra009874.1-P	Field mustard	golgi	55.12	54.4
HORVU4Hr1G010270.2	Barley	golgi, peroxisome	56.69	54.0
Zm00001d033890_P001	Maize	golgi	58.79	53.21
Zm00001d033891_P001	Maize	cytosol, golgi, plasma membrane	56.17	53.1
Os03t0731050-00	Rice	plastid	55.38	49.3
Bra006342.1-P	Field mustard	cytosol	41.47	45.53
Bra018450.1-P	Field mustard	golgi	48.03	45.3
Bra004303.1-P	Field mustard	golgi, vacuole	48.82	44.71
Bra019951.1-P	Field mustard	endoplasmic reticulum, golgi, plastid	48.29	44.44
Bra015963.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	40.16	43.71
Bra033941.1-P	Field mustard	golgi	46.46	43.17
Bra019894.1-P	Field mustard	golgi	41.99	42.44
Bra004302.1-P	Field mustard	golgi	43.57	41.92
Bra008639.1-P	Field mustard	golgi	42.52	40.0
Bra011262.1-P	Field mustard	golgi	36.22	36.7
Bra013927.1-P	Field mustard	golgi, plastid	35.17	36.61
Bra010307.1-P	Field mustard	golgi, mitochondrion	35.43	33.67
Bra002743.1-P	Field mustard	golgi	34.12	33.42
Bra010446.1-P	Field mustard	mitochondrion	34.12	33.42
Bra012167.1-P	Field mustard	mitochondrion	34.38	32.83
Bra019138.1-P	Field mustard	plastid	33.33	32.56
Bra036729.1-P	Field mustard	mitochondrion	33.6	32.32
Bra024111.1-P	Field mustard	mitochondrion	31.5	32.0
Bra038843.1-P	Field mustard	mitochondrion	33.33	31.91
Bra034487.1-P	Field mustard	mitochondrion	31.23	31.9
Bra008752.1-P	Field mustard	mitochondrion	29.92	31.15
Bra016802.1-P	Field mustard	golgi	30.71	31.12
Bra031797.1-P	Field mustard	cytosol	27.56	31.07

Protein Annotations

EnsemblPlants:Bra031273.1	EnsemblPlants:Bra031273.1-P	EnsemblPlantsGene:Bra031273	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008375	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042
PANTHER:PTHR31042:SF54	PFAM:PF02485	SEG:seg	TMHMM:TMhelix	UniParc:UPI0002547822	UniProt:M4ER50
MapMan:35.1	:	:	:	:	:

Description

AT3G21310 (E=8e-183) | unknown protein

Coordinates

chrA05:-:16438664..16439898

Molecular Weight (calculated)

44233.8 Da

IEP (calculated)

9.011

GRAVY (calculated)

-0.172

Length

381 amino acids

Sequence
(BLAST)

001: MGKEEGVKDT PASNLKPTNQ CRTLLPMRVL QVFLMLVVLA LGISVVSMHM IKYLKVQTLA PTTFISTSDE ITTLESFIKP PSSVWHSMND SELLWRASIE
101: PRRYEYPFKR VPKMAFMFLT KGPLPFAPLW ERFFKGHEGI YSIYVHTLPD YKSDFPSSSV FYRRQIPSQH VAWGEMSMCE AERRLLANAL LDISNEWFVL
201: LSEACIPLRG FEFIYNYVSK SRYSFMGSAD EDGPYGRGRY SYAMGPEVQL SQWRKGSQWF EINRELALYI VEDIIYYHKF KEFCRPPCYV DEHYFPTMLS
301: IRYSHLLAKR TLTWTDWSKG GPHPTTFGKS VITEMFLKMI QKGQPCLYND QTSQVCYLFA RKFAPSALEP LLKLAPKVLG F

Best Arabidopsis Sequence Match ( AT3G21310.3 )
(BLAST)

001: MGMEEGIKDN AASAPNSRPT NQLKALLPMR VLQVFLLFFV LVLGISVISM HMIKYLKIQT LAPSTLISTY DERITLESLI KPPLNGWHSM NDSELLWRAS
101: MEPRILDYPF KRVPKMAFMF LTKGPLPFAP LWERFFKGHE GFYSIYVHTL PNYRSDFPSS SVFYRRQIPS QHVAWGEMSM CDAERRLLAN ALLDISNEWF
201: VLLSEACIPL RGFNFVYRYV SRSRYSFMGS VDEDGPYGRG RYSYAMGPEV SLNEWRKGSQ WFEINRALAV DIVEDMVYYN KFKEFCRPPC YVDEHYFPTM
301: LSIGYPDFLA NRTLTWTDWS RGGAHPATFG KADITEKFIK KLSRGKACFY NDQPSQVCYL FARKFAPSAL KPLLKLAPKV LGF

Arabidopsis Description

Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Source:TAIR;Acc:AT3G21310]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.