Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, golgi
Predictor Summary:
Predictor Summary:
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G062000.1 | Wheat | golgi, plasma membrane, plastid | 94.0 | 95.92 |
| TraesCS4D01G061000.1 | Wheat | golgi, plasma membrane, plastid | 93.5 | 95.41 |
| TraesCS4A01G253400.1 | Wheat | golgi, plasma membrane, plastid | 93.0 | 95.14 |
| EER93518 | Sorghum | golgi, plasma membrane, plastid | 84.5 | 87.56 |
| Zm00001d033892_P001 | Maize | endoplasmic reticulum, golgi, plasma membrane | 73.5 | 80.55 |
| Zm00001d033890_P001 | Maize | golgi | 83.25 | 79.1 |
| EER93516 | Sorghum | golgi | 75.0 | 78.95 |
| Zm00001d033891_P001 | Maize | cytosol, golgi, plasma membrane | 75.0 | 74.44 |
| EER93517 | Sorghum | golgi, mitochondrion, plasma membrane | 74.5 | 74.13 |
| PGSC0003DMT400035937 | Potato | mitochondrion | 51.75 | 70.41 |
| VIT_09s0002g02660.t01 | Wine grape | cytosol | 50.25 | 68.37 |
| Os03t0731050-00 | Rice | plastid | 72.75 | 67.99 |
| GSMUA_Achr3P25730_001 | Banana | golgi | 60.25 | 67.13 |
| GSMUA_Achr1P14240_001 | Banana | golgi | 58.25 | 65.08 |
| CDX80552 | Canola | cytosol | 24.5 | 64.05 |
| KRH48972 | Soybean | cytosol | 33.75 | 63.38 |
| KRH13326 | Soybean | cytosol | 33.25 | 62.44 |
| CDX78440 | Canola | cytosol | 50.25 | 62.23 |
| VIT_04s0008g00690.t01 | Wine grape | golgi, nucleus, plasma membrane, plastid | 59.75 | 62.08 |
| KRH05512 | Soybean | nucleus | 57.5 | 60.37 |
| Solyc08g065860.2.1 | Tomato | golgi | 57.5 | 60.37 |
| AT5G11730.1 | Thale cress | golgi | 58.25 | 60.36 |
| KRH47176 | Soybean | cytosol, golgi, plasma membrane | 58.25 | 60.21 |
| CDX97141 | Canola | golgi | 58.0 | 60.1 |
| CDX97139 | Canola | golgi | 58.0 | 60.1 |
| Bra008941.1-P | Field mustard | golgi | 58.0 | 60.1 |
| KRH15500 | Soybean | nucleus | 57.0 | 60.0 |
| CDX69735 | Canola | golgi | 57.75 | 59.84 |
| KRH44223 | Soybean | cytosol, golgi, plasma membrane | 57.5 | 59.43 |
| Bra006114.1-P | Field mustard | golgi | 53.0 | 59.22 |
| CDX70417 | Canola | cytosol | 43.75 | 58.33 |
| AT3G21310.1 | Thale cress | golgi | 55.5 | 57.96 |
| Bra006113.1-P | Field mustard | golgi | 55.75 | 57.77 |
| AT5G25970.2 | Thale cress | golgi | 55.75 | 57.62 |
| PGSC0003DMT400012489 | Potato | golgi | 53.0 | 56.84 |
| Bra031273.1-P | Field mustard | golgi | 54.0 | 56.69 |
| CDY51451 | Canola | golgi | 53.75 | 56.43 |
| Solyc03g121280.2.1 | Tomato | golgi, nucleus, plasma membrane | 54.25 | 56.36 |
| CDX88209 | Canola | golgi | 49.0 | 56.0 |
| Bra009874.1-P | Field mustard | golgi | 54.0 | 55.96 |
| Solyc06g062490.2.1 | Tomato | golgi | 51.75 | 55.95 |
| CDX78439 | Canola | golgi | 55.75 | 55.61 |
| PGSC0003DMT400006434 | Potato | golgi, nucleus, plasma membrane | 53.5 | 55.44 |
| CDY56916 | Canola | cytosol, golgi, plasma membrane, plastid | 52.75 | 55.38 |
| CDX97140 | Canola | golgi | 56.75 | 55.37 |
| HORVU5Hr1G077980.1 | Barley | cytosol, plastid | 25.0 | 54.64 |
| Bra030418.1-P | Field mustard | golgi | 53.0 | 54.5 |
| CDX87842 | Canola | golgi | 53.0 | 54.5 |
| CDY43927 | Canola | golgi | 53.0 | 54.5 |
| AT1G51770.1 | Thale cress | golgi | 53.0 | 52.22 |
| CDX70416 | Canola | golgi | 55.0 | 50.34 |
| HORVU5Hr1G001380.1 | Barley | endoplasmic reticulum, golgi, peroxisome, plastid | 49.5 | 48.29 |
| HORVU5Hr1G001360.2 | Barley | endoplasmic reticulum, golgi, peroxisome, plastid | 44.75 | 47.35 |
| HORVU5Hr1G078030.1 | Barley | cytosol, golgi, peroxisome, plastid | 49.25 | 47.13 |
| HORVU1Hr1G085260.1 | Barley | cytosol | 28.25 | 47.08 |
| HORVU3Hr1G081930.2 | Barley | golgi | 43.5 | 44.5 |
| HORVU7Hr1G076790.5 | Barley | golgi | 44.25 | 43.28 |
| HORVU2Hr1G127680.1 | Barley | cytosol, golgi, plasma membrane | 45.0 | 43.17 |
| HORVU2Hr1G100480.3 | Barley | cytosol | 33.5 | 41.23 |
| HORVU3Hr1G007160.1 | Barley | cytosol, golgi | 22.0 | 40.74 |
| HORVU7Hr1G097200.3 | Barley | golgi | 35.5 | 38.38 |
| HORVU6Hr1G030990.4 | Barley | golgi | 37.0 | 37.95 |
| HORVU7Hr1G109810.1 | Barley | golgi | 35.25 | 37.3 |
| HORVU0Hr1G039960.6 | Barley | golgi | 20.75 | 31.92 |
| HORVU3Hr1G065000.4 | Barley | cytosol | 24.75 | 30.65 |
| HORVU1Hr1G085240.4 | Barley | golgi, mitochondrion, plastid | 34.25 | 29.15 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G010270.2 | EnsemblPlantsGene:HORVU4Hr1G010270 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0008375 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | InterPro:Glyco_trans_14 | PANTHER:PTHR31042 | PANTHER:PTHR31042:SF54 |
| PFAM:PF02485 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000B482100 | UniProt:A0A287N6M8 | MapMan:35.1 |
Description
No Description!
Coordinates
chrchr4H:+:30696182..30700520
Molecular Weight (calculated)
45607.6 Da
IEP (calculated)
9.089
GRAVY (calculated)
-0.280
Length
400 amino acids
Sequence
(BLAST)
(BLAST)
001: QQQQQPAGAM QARVASMEDM KEARLAAQGQ GGRVFPTGML KVFLGFLLLG VGLSAAGMYM ARHTLAAAAP AIFRPCLGAS AAGAEERPLD GLERWTRPPA
101: RARHAMTDEE LLWRASFAPR VRPYPFRRVP KVAFMFLTRG PLPLAPLWER FFRGHEGRYS VYVHALPSYR ANFTKDSVFY QRQIASKVAE WGQMSMCDAE
201: RRLLANALLD ISNEWFVLVS ESCIPIFDFN TTYEYFQNSS QSFVMVFDDP GPYGRGRYNY NMTPEVELTQ WRKGSQWFEV DRDLGIEIIR DTRYYPKFKE
301: FCRPHCYVDE HYFPTMLTIE APQSLANRSV TWVDWSRGGA HPATFGRGDI SEEFLRRVQT GRTCLYNNQN TTTCFLFARK FAPSALQPLL VLAPTVLGYG
101: RARHAMTDEE LLWRASFAPR VRPYPFRRVP KVAFMFLTRG PLPLAPLWER FFRGHEGRYS VYVHALPSYR ANFTKDSVFY QRQIASKVAE WGQMSMCDAE
201: RRLLANALLD ISNEWFVLVS ESCIPIFDFN TTYEYFQNSS QSFVMVFDDP GPYGRGRYNY NMTPEVELTQ WRKGSQWFEV DRDLGIEIIR DTRYYPKFKE
301: FCRPHCYVDE HYFPTMLTIE APQSLANRSV TWVDWSRGGA HPATFGRGDI SEEFLRRVQT GRTCLYNNQN TTTCFLFARK FAPSALQPLL VLAPTVLGYG
001: MQNRIVQLEE GKENGITVRS GHYKGFPSKL LLLLGLFLTF SVTVFIISVS TIKYTGIQSV VTTVTSSFVP CREGEPNSLS KWIQPPAVLM HNMSDEELLW
101: RASFWPRRKE YPFKRVPKVA FMFLTKGPLP LASLWERFLK GHKGLYSVYL HPHPSFTAKF PASSVFHRRQ IPSQVAEWGR MSMCDAEKRL LANALLDVSN
201: EWFVLVSESC IPLYNFTTIY SYLSRSKHSF MGAFDDPGPF GRGRYNGNME PEVPLTKWRK GSQWFEVNRD LAATIVKDTL YYPKFKEFCR PACYVDEHYF
301: PTMLTIEKPT VLANRSLTWV DWSRGGPHPA TFGRSDITEN FFGKIFDGRN CSYNGRNTSM CYLFARKFAP SALEPLLHIA PKILGF
101: RASFWPRRKE YPFKRVPKVA FMFLTKGPLP LASLWERFLK GHKGLYSVYL HPHPSFTAKF PASSVFHRRQ IPSQVAEWGR MSMCDAEKRL LANALLDVSN
201: EWFVLVSESC IPLYNFTTIY SYLSRSKHSF MGAFDDPGPF GRGRYNGNME PEVPLTKWRK GSQWFEVNRD LAATIVKDTL YYPKFKEFCR PACYVDEHYF
301: PTMLTIEKPT VLANRSLTWV DWSRGGPHPA TFGRSDITEN FFGKIFDGRN CSYNGRNTSM CYLFARKFAP SALEPLLHIA PKILGF
Arabidopsis Description
At5g11730 [Source:UniProtKB/TrEMBL;Acc:Q9LYF7]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.