Factsheet for HORVU5Hr1G001360.2

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, plastid, peroxisome

Predictor Summary:

plastid 2
golgi 1
endoplasmic reticulum 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G001380.1	Barley	endoplasmic reticulum, golgi, peroxisome, plastid	96.83	89.27
HORVU5Hr1G078030.1	Barley	cytosol, golgi, peroxisome, plastid	93.39	84.45
TraesCS5A01G010800.1	Wheat	endoplasmic reticulum, golgi, peroxisome, plastid	87.57	78.81
HORVU5Hr1G077980.1	Barley	cytosol, plastid	38.1	78.69
TraesCS3B01G478200.1	Wheat	mitochondrion	73.02	78.19
TraesCS5B01G008600.1	Wheat	endoplasmic reticulum, golgi, peroxisome	85.45	77.83
TraesCS5D01G015600.1	Wheat	cytosol, golgi, mitochondrion	86.51	74.32
Os12t0635500-01	Rice	golgi, plasma membrane, plastid	63.49	58.97
KXG24124	Sorghum	cytosol, golgi, plasma membrane, plastid	62.96	58.48
Zm00001d031187_P002	Maize	plastid	61.38	58.29
Zm00001d041221_P001	Maize	golgi, mitochondrion, plasma membrane, plastid	60.05	57.32
HORVU4Hr1G010270.2	Barley	golgi, peroxisome	47.35	44.75
GSMUA_Achr1P04580_001	Banana	cytosol	33.86	43.24
HORVU1Hr1G085260.1	Barley	cytosol	26.19	41.25
GSMUA_Achr1P04590_001	Banana	cytosol	32.8	40.92
HORVU3Hr1G007160.1	Barley	cytosol, golgi	22.22	38.89
HORVU3Hr1G081930.2	Barley	golgi	38.1	36.83
HORVU7Hr1G076790.5	Barley	golgi	38.62	35.7
HORVU2Hr1G127680.1	Barley	cytosol, golgi, plasma membrane	38.36	34.77
HORVU2Hr1G100480.3	Barley	cytosol	28.57	33.23
HORVU7Hr1G097200.3	Barley	golgi	30.69	31.35
HORVU7Hr1G109810.1	Barley	golgi	30.42	30.42
HORVU0Hr1G039960.6	Barley	golgi	20.63	30.0
HORVU6Hr1G030990.4	Barley	golgi	30.69	29.74
HORVU3Hr1G065000.4	Barley	cytosol	21.16	24.77
HORVU1Hr1G085240.4	Barley	golgi, mitochondrion, plastid	30.42	24.47

Protein Annotations

EnsemblPlants:HORVU5Hr1G001360.2	EnsemblPlantsGene:HORVU5Hr1G001360	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008375
GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042	PANTHER:PTHR31042:SF28
PFAM:PF02485	SEG:seg	TMHMM:TMhelix	UniParc:UPI000B46DC97	UniProt:A0A287Q6J3	MapMan:35.1

Description

No Description!

Coordinates

chrchr5H:-:4157959..4160604

Molecular Weight (calculated)

42101.2 Da

IEP (calculated)

9.653

GRAVY (calculated)

-0.302

Length

378 amino acids

Sequence
(BLAST)

001: MQAGGGAAAV VVDGKDVHAT PARAAPRRFS LLRPVLLSAV LATGFLAAAL LMFLGGASSY YRLPRLAVPD ALRPAPACHK QRGEEGQEGG AAERWWARPP
101: ASSAWHNMSE EELLWAASFE PRAQHRRPHR HGTPKVAFMF LTRGPLPLAP LWERFFNGTG AEGGRERLFS VYVHTTPGYR LDFPPSSPFH RRQVPSKATR
201: WGDANVVDAE RRLLANALLD FNNERFVLVS ESCIPLYPLP VVHAYLTRSR DSFVGAFDEP SQHGRGRYRV GLAPDVTLAQ WRKGAQWFEM DRHLAVFVIA
301: DDRYYPRFRN ECRAPCYVDE HYLPTVLSIV APEQIANRTI TLVDWSRGGA HPATFGAPDV TEDFLGRLVG KKGSPERC

Best Arabidopsis Sequence Match ( AT3G21310.3 )
(BLAST)

001: MGMEEGIKDN AASAPNSRPT NQLKALLPMR VLQVFLLFFV LVLGISVISM HMIKYLKIQT LAPSTLISTY DERITLESLI KPPLNGWHSM NDSELLWRAS
101: MEPRILDYPF KRVPKMAFMF LTKGPLPFAP LWERFFKGHE GFYSIYVHTL PNYRSDFPSS SVFYRRQIPS QHVAWGEMSM CDAERRLLAN ALLDISNEWF
201: VLLSEACIPL RGFNFVYRYV SRSRYSFMGS VDEDGPYGRG RYSYAMGPEV SLNEWRKGSQ WFEINRALAV DIVEDMVYYN KFKEFCRPPC YVDEHYFPTM
301: LSIGYPDFLA NRTLTWTDWS RGGAHPATFG KADITEKFIK KLSRGKACFY NDQPSQVCYL FARKFAPSAL KPLLKLAPKV LGF

Arabidopsis Description

Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Source:TAIR;Acc:AT3G21310]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.