Factsheet for HORVU3Hr1G081930.2

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

nucleus 1
golgi 3
plastid 1
extracellular 1
endoplasmic reticulum 2
vacuole 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	golgi
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G379500.1	Wheat	golgi	94.37	94.62
TraesCS3A01G386500.1	Wheat	golgi	93.61	93.61
TraesCS3B01G418600.1	Wheat	golgi	91.56	92.99
Os01t0875800-01	Rice	golgi	69.57	70.83
EES03971	Sorghum	golgi	65.22	64.56
Zm00001d042652_P001	Maize	golgi, peroxisome, vacuole	65.98	60.0
HORVU7Hr1G076790.5	Barley	golgi	55.5	53.06
HORVU5Hr1G077980.1	Barley	cytosol, plastid	22.51	48.09
HORVU2Hr1G127680.1	Barley	cytosol, golgi, plasma membrane	51.15	47.96
HORVU1Hr1G085260.1	Barley	cytosol	27.88	45.42
HORVU3Hr1G007160.1	Barley	cytosol, golgi	24.55	44.44
HORVU4Hr1G010270.2	Barley	golgi, peroxisome	44.5	43.5
HORVU5Hr1G001380.1	Barley	endoplasmic reticulum, golgi, peroxisome, plastid	41.94	40.0
HORVU2Hr1G100480.3	Barley	cytosol	33.25	40.0
HORVU5Hr1G078030.1	Barley	cytosol, golgi, peroxisome, plastid	41.43	38.76
HORVU5Hr1G001360.2	Barley	endoplasmic reticulum, golgi, peroxisome, plastid	36.83	38.1
HORVU7Hr1G097200.3	Barley	golgi	35.55	37.57
HORVU7Hr1G109810.1	Barley	golgi	35.55	36.77
HORVU6Hr1G030990.4	Barley	golgi	34.53	34.62
HORVU3Hr1G065000.4	Barley	cytosol	26.6	32.2
HORVU0Hr1G039960.6	Barley	golgi	20.97	31.54
HORVU1Hr1G085240.4	Barley	golgi, mitochondrion, plastid	32.99	27.45

Protein Annotations

EMBL:AK372948	EnsemblPlants:HORVU3Hr1G081930.2	EnsemblPlantsGene:HORVU3Hr1G081930	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008375	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042
PANTHER:PTHR31042:SF21	PFAM:PF02485	SEG:seg	TMHMM:TMhelix	UniParc:UPI0002008232	UniProt:F2E9X3
MapMan:35.1	:	:	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2E9X3]

Coordinates

chrchr3H:-:596708676..596713918

Molecular Weight (calculated)

44290.0 Da

IEP (calculated)

9.431

GRAVY (calculated)

-0.205

Length

391 amino acids

Sequence
(BLAST)

001: MKGGVVDDLR VMLARKESST CLARSVMFLV IFAVGVIAGL WTATGPRTQY SRTYNSIVFP STTTTVYAEA GAEAEAGFAE FVAPTQLMHD MTDDQLFWRA
101: SMVPVDAQYP FKRVPKVAFM FLTGSGELPL APLWERFFRG HEDRFSVYVH APPGVTVNVS ADSPFYGRQI PSQETAWGSI SLMDAEKRLL ANALLDFSNE
201: RFVLLSESCI PLHSFRAVYD YLVGSRHSFV EVYFQQTKQC QGRYSRRMAP AIRLPQWRKG SQWFELNRDL AISVLADTKY YPLFRRHCRP SCYPDEHYLP
301: TTVDMLHGAR NANRTVTYVD WTKGGAHPAK YTASNVTAAA IQGIRRRRWK GDRPSCYYND RPTSMCFLFA RKFAPDTLGP LLNMSSAVMG Y

Best Arabidopsis Sequence Match ( AT1G10280.1 )
(BLAST)

001: MARGGKEEGE KHIGLLKLAQ TLSFLLIFMA GIIIGLAASS HIDRYFNSLP RMFSSTTNLQ SIPFSTPDYS NCTIIHRDCT GNDDNESDDG GVKAEKPKVR
101: DCWSIDGFVR PENLSHGMTD DELFWRASMV PVKEEYPYDR VPKVAFMFLT RGPLPMLPLW EKFFKGNEKY LSVYVHTPPG YDMNVSRDSP FYDRQIPSQR
201: VEWGSPLLTD AEKRLLANAL LDFSNERFVL LSESCVPVYN FSTVYTYLIN SAYSFVDSYD EPTRYGRGRY SRKMLPDIKL HHWRKGSQWF EVNRKIAIYI
301: ISDSKYYSLF KQFCRPACYP DEHYIPTFLN MFHGSMNANR SVTWVDWSIG GPHPATYAAA NITEGFLQSI RKNETDCLYN EEPTSLCFLF ARKFSPSALA
401: PLMNLSSTVL GF

Arabidopsis Description

At1g10280 [Source:UniProtKB/TrEMBL;Acc:Q9SY70]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.