Factsheet for HORVU0Hr1G039960.6

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

mitochondrion 3
golgi 3
extracellular 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	golgi
Predotar:	secretory
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G134300.1	Wheat	golgi	97.69	65.13
TraesCS1A01G114000.1	Wheat	golgi	97.31	64.87
TraesCS1D01G115700.1	Wheat	golgi	96.92	64.78
Os05t0170000-02	Rice	golgi	81.92	53.38
EES19116	Sorghum	golgi	78.08	53.28
VIT_14s0066g00820.t01	Wine grape	cytosol, golgi, mitochondrion, plastid	53.08	42.59
GSMUA_Achr2P14170_001	Banana	mitochondrion	56.54	40.05
KRH56549	Soybean	golgi	54.62	39.01
Zm00001d009810_P003	Maize	mitochondrion, vacuole	79.62	38.98
CDX69574	Canola	mitochondrion	53.46	37.98
CDY09869	Canola	mitochondrion	53.46	37.98
KRG93228	Soybean	golgi	53.85	37.84
Bra008752.1-P	Field mustard	mitochondrion	53.08	37.7
Solyc02g086550.2.1	Tomato	golgi, mitochondrion	53.46	37.17
AT5G14550.1	Thale cress	mitochondrion	53.08	36.6
PGSC0003DMT400001379	Potato	mitochondrion	52.69	32.7
HORVU3Hr1G065000.4	Barley	cytosol	38.08	30.65
HORVU2Hr1G100480.3	Barley	cytosol	28.85	23.08
HORVU1Hr1G085260.1	Barley	cytosol	20.77	22.5
HORVU7Hr1G097200.3	Barley	golgi	30.38	21.35
HORVU3Hr1G081930.2	Barley	golgi	31.54	20.97
HORVU4Hr1G010270.2	Barley	golgi, peroxisome	31.92	20.75
HORVU5Hr1G001360.2	Barley	endoplasmic reticulum, golgi, peroxisome, plastid	30.0	20.63
HORVU7Hr1G076790.5	Barley	golgi	32.31	20.54
HORVU7Hr1G109810.1	Barley	golgi	29.62	20.37
HORVU6Hr1G030990.4	Barley	golgi	30.0	20.0
HORVU2Hr1G127680.1	Barley	cytosol, golgi, plasma membrane	31.92	19.9
HORVU5Hr1G001380.1	Barley	endoplasmic reticulum, golgi, peroxisome, plastid	30.0	19.02
HORVU5Hr1G078030.1	Barley	cytosol, golgi, peroxisome, plastid	30.38	18.9
HORVU3Hr1G007160.1	Barley	cytosol, golgi	15.38	18.52
HORVU5Hr1G077980.1	Barley	cytosol, plastid	11.15	15.85
HORVU1Hr1G085240.4	Barley	golgi, mitochondrion, plastid	23.85	13.19

Protein Annotations

EnsemblPlants:HORVU0Hr1G039960.6	EnsemblPlantsGene:HORVU0Hr1G039960	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008375
GO:GO:0016020	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042	PANTHER:PTHR31042:SF6	PFAM:PF02485
SEG:seg	TMHMM:TMhelix	UniParc:UPI000B460BCF	UniProt:A0A287EDK9	MapMan:35.1	:

Description

No Description!

Coordinates

chrchrUn:+:249554573..249558040

Molecular Weight (calculated)

29536.3 Da

IEP (calculated)

8.324

GRAVY (calculated)

-0.182

Length

260 amino acids

Sequence
(BLAST)

001: MRPRRHSYGR GGRSAAAAVL LVLCLCVTGV FLLLLHGSSP PLDADEAKDQ AAAAGGGRHE EPVVLAEVEE APLPPGNARV AFLFIARNRL PLDLVWDAFF
101: RADNEGRFSI FVHSRPGFVL TRATTRSRFF YNRQVNNSVQ VDWGEASMIE AERILLSHAL KDPFNERFVF VSDSCVPLYN FNYTYDYIMS ASTSFVDSFA
201: DTKQGRYNPR MDPIIPVENW RKGSQWAVLI KKHAEVVVYD DVVLPEFKKH CRRRPLPEFW

Best Arabidopsis Sequence Match ( AT5G14550.1 )
(BLAST)

001: MKKKVSQQKL LYRWKRKVYA TLMFAFCFGT FVFIQARFAS IQARFNRISA SLDSLKKPRL DQRPQIAFLF IARNRLPLEF VWDAFFKGED GKFSIYVHSR
101: PGFVLNEATT RSKYFLDRQL NDSIQVDWGE STMIEAERVL LRHALRDSFN HRFVFLSDSC IPLYSFSYTY NYIMSTPTSF VDSFADTKDS RYNPRMNPII
201: PVRNWRKGSQ WVVLNRKHAE IVVNDTSVFP MFQQHCRRKS LPEFWRDRPV PAEGWKEHNC IPDEHYVQTL LSQKGVDSEL TRRSLTHSAW DLSSSKSNER
301: RGWHPMTYKF SDATPDLIQS IKGIDNINYE TEYRREWCSS KGKPSPCFLF ARKFTRPAAL RLLRETILLE GKEHDNK

Arabidopsis Description

At5g14550 [Source:UniProtKB/TrEMBL;Acc:B6IDH4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.