Factsheet for HORVU5Hr1G001380.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, plastid, peroxisome

Predictor Summary:

plastid 1
mitochondrion 1
golgi 1
endoplasmic reticulum 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G001360.2	Barley	endoplasmic reticulum, golgi, peroxisome, plastid	89.27	96.83
HORVU5Hr1G077980.1	Barley	cytosol, plastid	43.17	96.72
HORVU5Hr1G078030.1	Barley	cytosol, golgi, peroxisome, plastid	92.93	91.15
TraesCS3B01G478200.1	Wheat	mitochondrion	75.12	87.25
TraesCS5A01G010800.1	Wheat	endoplasmic reticulum, golgi, peroxisome, plastid	87.32	85.24
TraesCS5B01G008600.1	Wheat	endoplasmic reticulum, golgi, peroxisome	85.85	84.82
TraesCS5D01G015600.1	Wheat	cytosol, golgi, mitochondrion	87.07	81.14
Os12t0635500-01	Rice	golgi, plasma membrane, plastid	63.9	64.37
KXG24124	Sorghum	cytosol, golgi, plasma membrane, plastid	63.17	63.64
Zm00001d041221_P001	Maize	golgi, mitochondrion, plasma membrane, plastid	60.98	63.13
Zm00001d031187_P002	Maize	plastid	61.22	63.07
GSMUA_Achr1P04580_001	Banana	cytosol	36.1	50.0
HORVU4Hr1G010270.2	Barley	golgi, peroxisome	48.29	49.5
HORVU1Hr1G085260.1	Barley	cytosol	28.29	48.33
HORVU3Hr1G007160.1	Barley	cytosol, golgi	24.88	47.22
GSMUA_Achr1P04590_001	Banana	cytosol	34.88	47.19
HORVU3Hr1G081930.2	Barley	golgi	40.0	41.94
HORVU7Hr1G076790.5	Barley	golgi	40.0	40.1
HORVU2Hr1G127680.1	Barley	cytosol, golgi, plasma membrane	40.0	39.33
HORVU2Hr1G100480.3	Barley	cytosol	29.02	36.62
HORVU7Hr1G097200.3	Barley	golgi	32.2	35.68
HORVU7Hr1G109810.1	Barley	golgi	31.46	34.13
HORVU6Hr1G030990.4	Barley	golgi	32.44	34.1
HORVU0Hr1G039960.6	Barley	golgi	19.02	30.0
HORVU3Hr1G065000.4	Barley	cytosol	23.17	29.41
HORVU1Hr1G085240.4	Barley	golgi, mitochondrion, plastid	31.95	27.87

Protein Annotations

EnsemblPlants:HORVU5Hr1G001380.1	EnsemblPlantsGene:HORVU5Hr1G001380	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008375
GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042	PANTHER:PTHR31042:SF28
PFAM:PF02485	SEG:seg	TMHMM:TMhelix	UniParc:UPI000B46AECB	UniProt:A0A287Q6K5	MapMan:35.1

Description

No Description!

Coordinates

chrchr5H:+:4178203..4181384

Molecular Weight (calculated)

45780.8 Da

IEP (calculated)

9.812

GRAVY (calculated)

-0.263

Length

410 amino acids

Sequence
(BLAST)

001: MQAGGGAPAV DGKDVQATPA RAAQRSFSLL RPVLLSAVLA TGFLAAALLM FLGGASSSYY RLPRLAVPDA LRPAPACHKQ RGEEGQEGGA AERWWARPPA
101: RSAWHNMSEE ELLWAASFEP RAQHRRQHRT PKVAFMFLTR GPLPLAPLWE RFFNGTGAEG GRERLFSVYV HTTPGYRLEF PPSSPFHRRQ VPSKATRWGD
201: ANVVDAERRL LANALLDFNN ERFVLVSESC IPLYPLPVVH AYLTRSRHSF VGAFDEPSQH GRGRYRVGLA PDVTLAQWRK GAQWFEMDRH LAVFVIADDR
301: YYPRFRNECR APCYVDEHYL PTVLSIVAPE QIANRTITLV DWSRGGAHPA TFGAPDVTED FLGRLVGKKG SPERCMYNGQ PIEVCFLFAR KFAPAALPQL
401: LSLSSKILGY

Best Arabidopsis Sequence Match ( AT3G21310.1 )
(BLAST)

001: MGMEEGIKDN AASAPNSRPT NQLKALLPMR VLQVFLLFFV LVLGISVISM HMIKYLKIQT LAPSTLISTY DERITLESLI KPPLNGWHSM NDSELLWRAS
101: MEPRILDYPF KRVPKMAFMF LTKGPLPFAP LWERFFKGHE GFYSIYVHTL PNYRSDFPSS SVFYRRQIPS QHVAWGEMSM CDAERRLLAN ALLDISNEWF
201: VLLSEACIPL RGFNFVYRYV SRSRYSFMGS VDEDGPYGRG RYSYAMGPEV SLNEWRKGSQ WFEINRALAV DIVEDMVYYN KFKEFCRPPC YVDEHYFPTM
301: LSIGYPDFLA NRTLTWTDWS RGGAHPATFG KADITEKFIK KLSRGKACFY NDQPSQVCYL FARKFAPSAL KPLLKLAPKV LGF

Arabidopsis Description

Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Source:TAIR;Acc:AT3G21310]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.