Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plasma membrane, golgi, plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- golgi 1
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d031187_P002 | Maize | plastid | 82.58 | 82.16 |
| KXG24124 | Sorghum | cytosol, golgi, plasma membrane, plastid | 83.33 | 81.08 |
| HORVU5Hr1G077980.1 | Barley | cytosol, plastid | 32.32 | 69.95 |
| Os12t0635500-01 | Rice | golgi, plasma membrane, plastid | 68.43 | 66.58 |
| TraesCS3B01G478200.1 | Wheat | mitochondrion | 58.59 | 65.72 |
| TraesCS5B01G008600.1 | Wheat | endoplasmic reticulum, golgi, peroxisome | 65.15 | 62.17 |
| TraesCS5A01G010800.1 | Wheat | endoplasmic reticulum, golgi, peroxisome, plastid | 64.9 | 61.19 |
| HORVU5Hr1G001380.1 | Barley | endoplasmic reticulum, golgi, peroxisome, plastid | 63.13 | 60.98 |
| HORVU5Hr1G001360.2 | Barley | endoplasmic reticulum, golgi, peroxisome, plastid | 57.32 | 60.05 |
| HORVU5Hr1G078030.1 | Barley | cytosol, golgi, peroxisome, plastid | 63.38 | 60.05 |
| TraesCS5D01G015600.1 | Wheat | cytosol, golgi, mitochondrion | 64.9 | 58.41 |
| Zm00001d033892_P001 | Maize | endoplasmic reticulum, golgi, plasma membrane | 49.24 | 53.42 |
| GSMUA_Achr1P04590_001 | Banana | cytosol | 39.9 | 52.15 |
| GSMUA_Achr1P04580_001 | Banana | cytosol | 38.64 | 51.69 |
| Zm00001d033891_P001 | Maize | cytosol, golgi, plasma membrane | 51.01 | 50.12 |
| Zm00001d033890_P001 | Maize | golgi | 53.03 | 49.88 |
| Zm00001d008568_P001 | Maize | golgi | 42.68 | 43.9 |
| Zm00001d039970_P001 | Maize | plastid | 39.9 | 42.82 |
| Zm00001d039969_P001 | Maize | plasma membrane | 41.92 | 41.19 |
| Zm00001d035039_P001 | Maize | plasma membrane | 41.41 | 39.61 |
| Zm00001d016103_P001 | Maize | golgi, plasma membrane, plastid | 44.19 | 39.24 |
| Zm00001d024348_P002 | Maize | mitochondrion | 36.11 | 38.65 |
| Zm00001d042652_P001 | Maize | golgi, peroxisome, vacuole | 41.92 | 38.6 |
| Zm00001d026711_P001 | Maize | cytosol, golgi, plasma membrane | 42.42 | 38.44 |
| Zm00001d053393_P002 | Maize | golgi, plastid | 42.68 | 37.64 |
| Zm00001d036482_P001 | Maize | plasma membrane | 34.85 | 36.9 |
| Zm00001d036668_P004 | Maize | plasma membrane | 35.1 | 36.77 |
| Zm00001d015429_P004 | Maize | golgi | 34.85 | 36.6 |
| Zm00001d014668_P001 | Maize | plasma membrane | 34.34 | 36.56 |
| Zm00001d002382_P002 | Maize | golgi, mitochondrion | 35.61 | 36.43 |
| Zm00001d026261_P001 | Maize | golgi, mitochondrion | 35.1 | 36.29 |
| Zm00001d053763_P001 | Maize | golgi | 35.1 | 35.82 |
| Zm00001d046936_P002 | Maize | golgi | 33.33 | 33.25 |
| Zm00001d043768_P001 | Maize | golgi, mitochondrion, plastid | 30.05 | 30.43 |
| Zm00001d009810_P003 | Maize | mitochondrion, vacuole | 30.81 | 22.98 |
Protein Annotations
| EnsemblPlants:Zm00001d041221_P001 | EnsemblPlants:Zm00001d041221_T001 | EnsemblPlantsGene:Zm00001d041221 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0008375 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | GO:GO:0016757 | InterPro:Glyco_trans_14 |
| PANTHER:PTHR31042 | PANTHER:PTHR31042:SF28 | PFAM:PF02485 | ProteinID:ONM32697.1 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI0008446035 | UniProt:A0A1D6MV49 | MapMan:35.1 | : | : | : |
Description
Core-2/I-branching beta-16-N-acetylglucosaminyltransferase family protein
Coordinates
chr3:-:106171262..106172646
Molecular Weight (calculated)
43466.1 Da
IEP (calculated)
9.993
GRAVY (calculated)
-0.151
Length
396 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQGAATAVD GSGSGSTARP PAALPGLKLL RRLLLVAVVG TGFLAVVVLL SSSWRYSSSM LPRVPAPDVR LPAPAGGGKV PLERWARGSA SAWHNLTDEE
101: LLWAASWRPG VRRYPYRRTP KVAFMFLTRG PLPLAPLWDR FFTGAGDARL FSVYVHATPG YRPGFPPASA FYRRLVPSQV ARWGEASMCD AERRLLANAL
201: LDPANERFVL LSESCVPLYG FPAVYSYLTR SRESFVGAFD DPGPHGRGRY RAGLGPEVTA GQFRKGAQWF ELDRDLAVGV VADGRYYPKF RDHCRPPCYV
301: DEHYLPTVLS IEAPARIANR SVTWVDWSRG GAHPATFGEE DVHEAFLRRL TAPGKDQGNC TYNGQPAEVC FLFARKFAPS TLRPLLSLAP KLLGYG
101: LLWAASWRPG VRRYPYRRTP KVAFMFLTRG PLPLAPLWDR FFTGAGDARL FSVYVHATPG YRPGFPPASA FYRRLVPSQV ARWGEASMCD AERRLLANAL
201: LDPANERFVL LSESCVPLYG FPAVYSYLTR SRESFVGAFD DPGPHGRGRY RAGLGPEVTA GQFRKGAQWF ELDRDLAVGV VADGRYYPKF RDHCRPPCYV
301: DEHYLPTVLS IEAPARIANR SVTWVDWSRG GAHPATFGEE DVHEAFLRRL TAPGKDQGNC TYNGQPAEVC FLFARKFAPS TLRPLLSLAP KLLGYG
001: MQCSRVLQLE EGKEIVVTSS RTGLTKAFPY KLLLLLGFFL AFTVVLFFIS VSTIKYYGIN SVVTSVTSSF VPCHEKINDL DKWIKPLVVL MHNMSDEELL
101: WGASFMPRRK EYPFNRVPKI AFMFLTMGPL PLAPLWERLL KGHEKLYSVY IHSPVSSSAK FPASSVFYRR HIPSQVAEWG RMTMCDAERR LLANALLDIS
201: NEWFVLLSES CIPLFNFTTI YTYMTKSEHS FMGSFDDPGA YGRGRYHGNM APEVFIDQWR KGSQWFEINR ELAVSIVKDT LYYPKFKEFC QPACYVDEHY
301: FPTMLTIEKP AALANRSVTW VDWSRGGAHP ATFGAQDINE EFFARILKGD NCTYNGGYTS MCYLFARKFS PSALEPLVQI APKLLSS
101: WGASFMPRRK EYPFNRVPKI AFMFLTMGPL PLAPLWERLL KGHEKLYSVY IHSPVSSSAK FPASSVFYRR HIPSQVAEWG RMTMCDAERR LLANALLDIS
201: NEWFVLLSES CIPLFNFTTI YTYMTKSEHS FMGSFDDPGA YGRGRYHGNM APEVFIDQWR KGSQWFEINR ELAVSIVKDT LYYPKFKEFC QPACYVDEHY
301: FPTMLTIEKP AALANRSVTW VDWSRGGAHP ATFGAQDINE EFFARILKGD NCTYNGGYTS MCYLFARKFS PSALEPLVQI APKLLSS
Arabidopsis Description
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q1PDT4]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.