Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, plastid, peroxisome
Predictor Summary:
Predictor Summary:
- plastid 2
- golgi 2
- extracellular 1
- endoplasmic reticulum 2
- vacuole 1
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G478200.1 | Wheat | mitochondrion | 77.86 | 92.63 |
| TraesCS5B01G008600.1 | Wheat | endoplasmic reticulum, golgi, peroxisome | 91.19 | 92.29 |
| TraesCS5D01G015600.1 | Wheat | cytosol, golgi, mitochondrion | 93.57 | 89.32 |
| HORVU5Hr1G001360.2 | Barley | endoplasmic reticulum, golgi, peroxisome, plastid | 78.81 | 87.57 |
| HORVU5Hr1G001380.1 | Barley | endoplasmic reticulum, golgi, peroxisome, plastid | 85.24 | 87.32 |
| HORVU5Hr1G077980.1 | Barley | cytosol, plastid | 37.86 | 86.89 |
| HORVU5Hr1G078030.1 | Barley | cytosol, golgi, peroxisome, plastid | 83.57 | 83.97 |
| Os12t0635500-01 | Rice | golgi, plasma membrane, plastid | 65.48 | 67.57 |
| KXG24124 | Sorghum | cytosol, golgi, plasma membrane, plastid | 63.57 | 65.6 |
| Zm00001d041221_P001 | Maize | golgi, mitochondrion, plasma membrane, plastid | 61.19 | 64.9 |
| Zm00001d031187_P002 | Maize | plastid | 61.19 | 64.57 |
| TraesCS4A01G253400.1 | Wheat | golgi, plasma membrane, plastid | 47.86 | 51.41 |
| GSMUA_Achr1P04580_001 | Banana | cytosol | 34.52 | 48.99 |
| TraesCS3A01G037000.1 | Wheat | cytosol | 35.48 | 48.06 |
| TraesCS3A01G036900.1 | Wheat | cytosol | 33.57 | 47.47 |
| GSMUA_Achr1P04590_001 | Banana | cytosol | 34.05 | 47.19 |
| TraesCS3A01G386500.1 | Wheat | golgi | 39.76 | 42.71 |
| TraesCS7A01G320800.1 | Wheat | cytosol, golgi, peroxisome | 39.29 | 40.74 |
| TraesCS1A01G022400.1 | Wheat | golgi, vacuole | 32.62 | 38.92 |
| TraesCS7A01G419900.1 | Wheat | golgi | 31.67 | 35.95 |
| TraesCS7A01G489600.1 | Wheat | golgi | 30.95 | 34.39 |
| TraesCS6A01G154200.1 | Wheat | golgi | 31.9 | 34.36 |
| TraesCS2A01G430900.2 | Wheat | mitochondrion | 30.95 | 33.68 |
| TraesCS1A01G386500.1 | Wheat | golgi, mitochondrion | 37.14 | 33.4 |
| TraesCS1A01G114000.1 | Wheat | golgi | 26.67 | 28.72 |
| TraesCS3A01G258700.1 | Wheat | golgi, mitochondrion, plastid | 26.67 | 28.5 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G010800.1 | EnsemblPlantsGene:TraesCS5A01G010800 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0008375 |
| GO:GO:0016020 | GO:GO:0016740 | InterPro:Glyco_trans_14 | PANTHER:PTHR31042 | PANTHER:PTHR31042:SF28 | PFAM:PF02485 |
| SEG:seg | TMHMM:TMhelix | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr5A:-:7105928..7107716
Molecular Weight (calculated)
46209.3 Da
IEP (calculated)
9.857
GRAVY (calculated)
-0.178
Length
420 amino acids
Sequence
(BLAST)
(BLAST)
001: MPGGGGGVAA VVVVDGKDGY VAPARAAPRS FPPKLLRSVL LSAVLATGFL AAALLMFFGG ASSYYRLPRL AVPDALLPAP ACDQKDGDQQ GGAAERWWAR
101: PPASSAWHNM SEEELLWAAS FEPRAQRRRP PGRRGTTPKV AFLFLTRGPL PLAPLWERFF NGTTGTGAAK GGRELFSVYV HTTPGYRLDF PPSSPFHRRQ
201: VPSKPTRWGN VNVVDAERRL LANALLDFNN ERFVLVSESC IPLYPLPVVH AYLTSSRHSF VGAFDDPSPH GRGRYRAGLA PDVTLSQWRK GAQWFEMDRR
301: LAVFVIADER YYPRFRTECR APCYVDEHYL PTVLSIEAPE RIANRSITLV DWSRGGAHPA TFGAADVTED SLGMLVGKKG NAERCMYNGQ PVEVCFLFAR
401: KFAPAALPQL LSLSSKIFGY
101: PPASSAWHNM SEEELLWAAS FEPRAQRRRP PGRRGTTPKV AFLFLTRGPL PLAPLWERFF NGTTGTGAAK GGRELFSVYV HTTPGYRLDF PPSSPFHRRQ
201: VPSKPTRWGN VNVVDAERRL LANALLDFNN ERFVLVSESC IPLYPLPVVH AYLTSSRHSF VGAFDDPSPH GRGRYRAGLA PDVTLSQWRK GAQWFEMDRR
301: LAVFVIADER YYPRFRTECR APCYVDEHYL PTVLSIEAPE RIANRSITLV DWSRGGAHPA TFGAADVTED SLGMLVGKKG NAERCMYNGQ PVEVCFLFAR
401: KFAPAALPQL LSLSSKIFGY
001: MKVMVMEMEE CVKENGSSTP KSRVTNQSRA LLPLRLLQIL LLFLVLTLGI SVVSIHMIKF LKIQRLDPVA PITLLSTYNH ESVTLDSFIR PPSNVWHTMN
101: DSELLWRASI EPQRNGYPFR RVPKLAFMFL AKGPLPFAPL WEKFCKGHEG LYSIYVHSLP SYKSDFSRSS VFYRRYIPSQ AVAWGEMSMG EAERRLLANA
201: LLDISNEWFV LLSESCIPLR GFSFIYSYVS ESRYSFMGAA DEEGPDGRGR YRTEMEPEIT LSQWRKGSQW FEINRKLAVE IVQDTTYYPK FKEFCRPPCY
301: VDEHYFPTML SMKHRVLLAN RTLTWTDWSR GGAHPATFGK ADVTESFLKK LTGAKSCLYN DHQSQICYLF ARKFAPSALE PLLQLAPKIL ELGSNISSTR
401: HSWYLF
101: DSELLWRASI EPQRNGYPFR RVPKLAFMFL AKGPLPFAPL WEKFCKGHEG LYSIYVHSLP SYKSDFSRSS VFYRRYIPSQ AVAWGEMSMG EAERRLLANA
201: LLDISNEWFV LLSESCIPLR GFSFIYSYVS ESRYSFMGAA DEEGPDGRGR YRTEMEPEIT LSQWRKGSQW FEINRKLAVE IVQDTTYYPK FKEFCRPPCY
301: VDEHYFPTML SMKHRVLLAN RTLTWTDWSR GGAHPATFGK ADVTESFLKK LTGAKSCLYN DHQSQICYLF ARKFAPSALE PLLQLAPKIL ELGSNISSTR
401: HSWYLF
Arabidopsis Description
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q1G300]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.