Factsheet for TraesCS1A01G386500.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi

Predictor Summary:

plastid 1
mitochondrion 3
golgi 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, mitochondrion
Any Predictor:	golgi, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G394500.1	Wheat	mitochondrion	60.81	97.26
TraesCS1B01G413900.1	Wheat	golgi, mitochondrion	87.15	87.72
HORVU1Hr1G085260.1	Barley	cytosol	44.33	86.25
HORVU1Hr1G085240.4	Barley	golgi, mitochondrion, plastid	76.02	75.53
Os02t0327500-01	Rice	golgi	59.53	63.33
Zm00001d016103_P001	Maize	golgi, plasma membrane, plastid	58.03	60.76
Zm00001d053393_P002	Maize	golgi, plastid	57.39	59.69
VIT_17s0000g03400.t01	Wine grape	cytosol	37.26	58.78
OQU84731	Sorghum	plastid	60.39	58.75
PGSC0003DMT400037735	Potato	cytosol	25.27	57.28
GSMUA_Achr6P09800_001	Banana	cytosol	34.05	57.19
VIT_17s0000g03410.t01	Wine grape	cytosol	35.76	56.61
PGSC0003DMT400014396	Potato	cytosol	35.33	55.74
KRH60391	Soybean	golgi, plastid	39.4	48.94
KRH41690	Soybean	golgi	38.33	48.12
PGSC0003DMT400037733	Potato	golgi	38.76	47.01
VIT_01s0011g03850.t01	Wine grape	golgi, plastid	40.47	46.67
Solyc05g009120.2.1	Tomato	nucleus	38.76	46.41
Bra015963.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	33.83	45.14
CDX73016	Canola	mitochondrion	33.4	44.96
TraesCS3A01G036900.1	Wheat	cytosol	28.05	44.11
Solyc05g009110.1.1	Tomato	golgi	35.33	42.86
PGSC0003DMT400013770	Potato	golgi	37.69	42.72
Solyc12g036400.1.1	Tomato	extracellular	37.69	42.72
TraesCS3A01G037000.1	Wheat	cytosol	28.27	42.58
Solyc03g119260.2.1	Tomato	golgi, nucleus, plasma membrane	38.54	42.25
TraesCS4A01G253400.1	Wheat	golgi, plasma membrane, plastid	35.33	42.2
KRH35920	Soybean	golgi, plasma membrane	37.47	42.17
KRG90861	Soybean	golgi, plasma membrane	37.9	42.04
KRH38159	Soybean	golgi	38.97	41.65
AT1G73810.1	Thale cress	golgi, nucleus, peroxisome	36.83	41.15
KRH48513	Soybean	golgi	38.97	40.72
KRH39163	Soybean	golgi	38.97	40.35
TraesCS7A01G320800.1	Wheat	cytosol, golgi, peroxisome	34.69	40.0
TraesCS1A01G022400.1	Wheat	golgi, vacuole	29.98	39.77
TraesCS3A01G386500.1	Wheat	golgi	31.91	38.11
TraesCS5A01G010800.1	Wheat	endoplasmic reticulum, golgi, peroxisome, plastid	33.4	37.14
TraesCS7A01G489600.1	Wheat	golgi	26.34	32.54
TraesCS7A01G419900.1	Wheat	golgi	25.48	32.16
TraesCS6A01G154200.1	Wheat	golgi	26.77	32.05
TraesCS2A01G430900.2	Wheat	mitochondrion	25.48	30.83
TraesCS3A01G258700.1	Wheat	golgi, mitochondrion, plastid	23.98	28.5
TraesCS1A01G114000.1	Wheat	golgi	23.34	27.95
CDX73017	Canola	cytosol	0.43	14.29

Protein Annotations

EnsemblPlants:TraesCS1A01G386500.1	EnsemblPlantsGene:TraesCS1A01G386500	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008375
GO:GO:0016020	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042	PANTHER:PTHR31042:SF7	PFAM:PF02485
SEG:seg	TMHMM:TMhelix	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr1A:+:555653030..555658446

Molecular Weight (calculated)

51232.4 Da

IEP (calculated)

10.303

GRAVY (calculated)

-0.194

Length

467 amino acids

Sequence
(BLAST)

001: MSAKSNHKQQ QQARMVAAAM STPCSIKPLL VAIPLALGFA LGIVATLSLM GSSASSALPG AALELFFPSP PVNVSTQVRS RRPRRPVQVQ PQAAPAVSAS
101: SPPPPPPVAD AGVNKHAALP AQRRRAAPAA GVSSPPSPPL ADAGSDDKRP VLPVNATTAD EEQGEGTVVD DDERLLALAA AAPRAVRVGA GAAPKVAFLF
201: LAKWGLPMAP LWERFFEGHR GLYSVYVHTD PAFNASAAAP DSGSAFHRRH IPSKEVKWGH ISMVEAERRL LAHALLDHSN SRFILLSESH VPLFDFPTVY
301: SYLTNSTKVY MESYDEPGGT GRGRYKRGMA PTITPWQWRK GSQWFEMDRA LAIDIVADNV YFPVFKKFCK RNCYTDEHYI PTFLHIRHPE VAARRTVTWV
401: DWSHGGPHPS RFTRMEVTVD FLRWLRGGTT CEYNGRTTTV CFLFARKFLP NSLTRFLRFA PKVMGFG

Best Arabidopsis Sequence Match ( AT1G10880.1 )
(BLAST)

001: MKKQKITTFV KELNLRMNSK KEPISLRYIH ILGTVVFFSS VSSLVILLAF YLNQRLQTSL FLVEDYHTLS SNPLTSPSLS PPPSPSPRSS GSNIADEELM
101: WRAAMAPRSP MKNETHPKVA FMFLTRWNLP LSPLWEMFFK GHEGFYSIYV HTSPEFTQEP PESSVFYKKR IPSKAVEWGK CSMMDAEKRL ISHALLEPSN
201: ARFVLLSETC IPLFNFTTIY TYLTRSTRSF LGSFDDPRPM GRGRYTPKML PHVSLSDWRK GNQWFEISRR VAAEIVSDRR YYAVFKDHCR PPCYIDEHYL
301: PTLVNKICPE MNSNRTVTWV DWSRGGSHPA RFVRKDIRVG FLDRIRFGSN CSYEGEVTNV CFLFGRKFHV STLEPLMKIA PYLFGI

Arabidopsis Description

Core-2/I-branching beta-1,6-n-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q0WR07]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.