Factsheet for TraesCS3A01G037000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G007160.1	Barley	cytosol, golgi	64.84	93.06
TraesCS3D01G042700.1	Wheat	golgi	96.77	75.38
TraesCS3B01G046900.1	Wheat	golgi	95.81	75.19
TraesCS3A01G036900.1	Wheat	cytosol	64.52	67.34
Os01t0133700-00	Rice	cytosol	45.16	63.35
Os01t0133600-00	Rice	golgi, mitochondrion, plasma membrane, plastid	60.32	44.74
TraesCS1A01G022400.1	Wheat	golgi, vacuole	43.87	38.64
TraesCS3A01G386500.1	Wheat	golgi	46.45	36.83
TraesCS4A01G253400.1	Wheat	golgi, plasma membrane, plastid	45.48	36.06
TraesCS5A01G010800.1	Wheat	endoplasmic reticulum, golgi, peroxisome, plastid	48.06	35.48
TraesCS7A01G320800.1	Wheat	cytosol, golgi, peroxisome	45.16	34.57
TraesCS7A01G419900.1	Wheat	golgi	37.42	31.35
TraesCS7A01G489600.1	Wheat	golgi	36.77	30.16
TraesCS6A01G154200.1	Wheat	golgi	36.77	29.23
TraesCS2A01G430900.2	Wheat	mitochondrion	36.13	29.02
TraesCS1A01G386500.1	Wheat	golgi, mitochondrion	42.58	28.27
TraesCS3A01G258700.1	Wheat	golgi, mitochondrion, plastid	32.9	25.95
TraesCS1A01G114000.1	Wheat	golgi	31.94	25.38

Protein Annotations

EnsemblPlants:TraesCS3A01G037000.1	EnsemblPlantsGene:TraesCS3A01G037000	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008375
GO:GO:0016020	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042	PANTHER:PTHR31042:SF11	PFAM:PF02485
SEG:seg	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr3A:+:20101388..20102530

Molecular Weight (calculated)

35211.8 Da

IEP (calculated)

7.708

GRAVY (calculated)

-0.407

Length

310 amino acids

Sequence
(BLAST)

001: MESGSGAMHN MTDEELLWRA SMVPRIKSTP KHRIVPKVAF LFLVRGDVPL RPLWDKFFDG HEGLYSIYVH TSPDYTGSPP PDSPFYGRII PSQRTSWGNI
101: NLMDAERRLL GNALLDVANA RFALLSESCI PILGFPALYA YLTGSNTSFV DSFDRRDGRA RHREFFAERN ISLAQWRKGA QWFEMDRALA LEVVSDETYY
201: GPVFRNGKHG VRNLEEHYPM TLASLLGWGR RNANRTVTYA DWRHPVGQHP KSHNGSEITE ELFEEMRRGY GDCYYNGGVA EVCAVFARKF KPEALDALLE
301: LAPKLFASGN

Best Arabidopsis Sequence Match ( AT1G68380.1 )
(BLAST)

001: MPTQKDQNSP LSQVIELLKK LLHHFHNLLL YFFILWIGVI VGIIVYPSLQ GLSSPSSLTI QSVSQLFFVT PPPPILSPSF QDNGLDMFLI PLKNIMHDME
101: DNELLWRASM DPKIRDYPYP RIPKVAFMFL TWGPLPLAPL WERFFRGHEG LFTIYVHTNS SYDEFMPQDS VFYGRRIPSK RVDWGNANMV EAERRLLANA
201: LLDINNERFI LLSESCIPLF NFSTVYSFLI DSTLTHVDSY DLTIGRVRYD RRMYPHIRMH QWRKGSQWFE LDRAMALEVV SDTFYWPIFK AYSRCPDEHY
301: IPTLLNMRPS LGLRNANRTL TWTDWSKRRA HPRLFGEWEV NVEFLEWLRM KSVGDCKKNG ENKMRLCFLF ARKFSSTALD ELLRLASIVM YF

Arabidopsis Description

Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9M9C3]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.