Factsheet for HORVU3Hr1G007160.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, cytosol

Predictor Summary:

golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi
Any Predictor:	cytosol, golgi
MultiLoc:	golgi
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G037000.1	Wheat	cytosol	93.06	64.84
Os01t0133700-00	Rice	cytosol	61.11	59.73
TraesCS3B01G046900.1	Wheat	golgi	92.59	50.63
TraesCS3D01G042700.1	Wheat	golgi	93.06	50.5
HORVU5Hr1G077980.1	Barley	cytosol, plastid	37.04	43.72
HORVU1Hr1G085260.1	Barley	cytosol	42.13	37.92
Os01t0133600-00	Rice	golgi, mitochondrion, plasma membrane, plastid	58.8	30.38
HORVU2Hr1G100480.3	Barley	cytosol	37.5	24.92
HORVU5Hr1G001380.1	Barley	endoplasmic reticulum, golgi, peroxisome, plastid	47.22	24.88
HORVU3Hr1G081930.2	Barley	golgi	44.44	24.55
HORVU5Hr1G078030.1	Barley	cytosol, golgi, peroxisome, plastid	46.76	24.16
HORVU7Hr1G097200.3	Barley	golgi	38.89	22.7
HORVU2Hr1G127680.1	Barley	cytosol, golgi, plasma membrane	43.06	22.3
HORVU5Hr1G001360.2	Barley	endoplasmic reticulum, golgi, peroxisome, plastid	38.89	22.22
HORVU7Hr1G076790.5	Barley	golgi	41.67	22.0
HORVU4Hr1G010270.2	Barley	golgi, peroxisome	40.74	22.0
HORVU3Hr1G065000.4	Barley	cytosol	32.87	21.98
HORVU6Hr1G030990.4	Barley	golgi	38.89	21.54
HORVU7Hr1G109810.1	Barley	golgi	36.57	20.9
HORVU1Hr1G085240.4	Barley	golgi, mitochondrion, plastid	42.13	19.36
HORVU0Hr1G039960.6	Barley	golgi	18.52	15.38

Protein Annotations

EnsemblPlants:HORVU3Hr1G007160.1	EnsemblPlantsGene:HORVU3Hr1G007160	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008375
GO:GO:0016020	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042	PANTHER:PTHR31042:SF11	PFAM:PF02485
UniParc:UPI000B46B0A4	UniProt:A0A287K1K6	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chrchr3H:-:17371831..17372807

Molecular Weight (calculated)

24448.9 Da

IEP (calculated)

8.779

GRAVY (calculated)

-0.340

Length

216 amino acids

Sequence
(BLAST)

001: RTSWGNINLM DAERRLLGNA LLDVANARFA LLSESCIPIL GFPALYAYLT GANTSFVDSF DRRDGRARHR QFFADRNISL AQWRKGAQWF EMDRALALEV
101: ASDETYYGPV FRNGKHGVRN LEEHYPMTLA SLLGWGARNA NRTVTYSDWR HPVGQHPKTH NSSDVTVELF QEMRRGYGDC YYNGVVAEVC AVFARKFKPE
201: ALHALLDLAP KLFASG

Best Arabidopsis Sequence Match ( AT1G51770.1 )
(BLAST)

001: MKVMVMEMEE CVKENGSSTP KSRVTNQSRA LLPLRLLQIL LLFLVLTLGI SVVSIHMIKF LKIQRLDPVA PITLLSTYNH ESVTLDSFIR PPSNVWHTMN
101: DSELLWRASI EPQRNGYPFR RVPKLAFMFL AKGPLPFAPL WEKFCKGHEG LYSIYVHSLP SYKSDFSRSS VFYRRYIPSQ AVAWGEMSMG EAERRLLANA
201: LLDISNEWFV LLSESCIPLR GFSFIYSYVS ESRYSFMGAA DEEGPDGRGR YRTEMEPEIT LSQWRKGSQW FEINRKLAVE IVQDTTYYPK FKEFCRPPCY
301: VDEHYFPTML SMKHRVLLAN RTLTWTDWSR GGAHPATFGK ADVTESFLKK LTGAKSCLYN DHQSQICYLF ARKFAPSALE PLLQLAPKIL ELGSNISSTR
401: HSWYLF

Arabidopsis Description

Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q1G300]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.