Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G394500.1 | Wheat | mitochondrion | 87.08 | 71.58 |
| PGSC0003DMT400037735 | Potato | cytosol | 49.17 | 57.28 |
| HORVU5Hr1G077980.1 | Barley | cytosol, plastid | 37.92 | 49.73 |
| TraesCS1B01G413900.1 | Wheat | golgi, mitochondrion | 87.5 | 45.26 |
| VIT_17s0000g03400.t01 | Wine grape | cytosol | 55.42 | 44.93 |
| VIT_17s0000g03410.t01 | Wine grape | cytosol | 54.58 | 44.41 |
| TraesCS1A01G386500.1 | Wheat | golgi, mitochondrion | 86.25 | 44.33 |
| PGSC0003DMT400014396 | Potato | cytosol | 54.17 | 43.92 |
| GSMUA_Achr6P09800_001 | Banana | cytosol | 50.42 | 43.53 |
| HORVU1Hr1G085240.4 | Barley | golgi, mitochondrion, plastid | 84.17 | 42.98 |
| HORVU3Hr1G007160.1 | Barley | cytosol, golgi | 37.92 | 42.13 |
| Os02t0327500-01 | Rice | golgi | 75.42 | 41.23 |
| Zm00001d016103_P001 | Maize | golgi, plasma membrane, plastid | 73.75 | 39.69 |
| Zm00001d053393_P002 | Maize | golgi, plastid | 72.92 | 38.98 |
| OQU84731 | Sorghum | plastid | 74.58 | 37.29 |
| KRH41690 | Soybean | golgi | 55.42 | 35.75 |
| CDX73016 | Canola | mitochondrion | 50.83 | 35.16 |
| KRH60391 | Soybean | golgi, plastid | 55.0 | 35.11 |
| Bra015963.1-P | Field mustard | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole | 50.42 | 34.57 |
| PGSC0003DMT400037733 | Potato | golgi | 55.0 | 34.29 |
| Solyc05g009110.1.1 | Tomato | golgi | 54.17 | 33.77 |
| Solyc05g009120.2.1 | Tomato | nucleus | 54.58 | 33.59 |
| VIT_01s0011g03850.t01 | Wine grape | golgi, plastid | 55.83 | 33.09 |
| Solyc12g036400.1.1 | Tomato | extracellular | 53.33 | 31.07 |
| PGSC0003DMT400013770 | Potato | golgi | 53.33 | 31.07 |
| Solyc03g119260.2.1 | Tomato | golgi, nucleus, plasma membrane | 53.75 | 30.28 |
| KRH39163 | Soybean | golgi | 56.67 | 30.16 |
| KRH35920 | Soybean | golgi, plasma membrane | 52.08 | 30.12 |
| KRH48513 | Soybean | golgi | 55.83 | 29.98 |
| KRH38159 | Soybean | golgi | 54.58 | 29.98 |
| AT1G73810.1 | Thale cress | golgi, nucleus, peroxisome | 52.08 | 29.9 |
| KRG90861 | Soybean | golgi, plasma membrane | 52.08 | 29.69 |
| HORVU7Hr1G076790.5 | Barley | golgi | 50.42 | 29.58 |
| HORVU2Hr1G127680.1 | Barley | cytosol, golgi, plasma membrane | 51.25 | 29.5 |
| HORVU5Hr1G001380.1 | Barley | endoplasmic reticulum, golgi, peroxisome, plastid | 48.33 | 28.29 |
| HORVU4Hr1G010270.2 | Barley | golgi, peroxisome | 47.08 | 28.25 |
| HORVU3Hr1G081930.2 | Barley | golgi | 45.42 | 27.88 |
| HORVU2Hr1G100480.3 | Barley | cytosol | 37.5 | 27.69 |
| HORVU5Hr1G078030.1 | Barley | cytosol, golgi, peroxisome, plastid | 47.92 | 27.51 |
| HORVU5Hr1G001360.2 | Barley | endoplasmic reticulum, golgi, peroxisome, plastid | 41.25 | 26.19 |
| HORVU3Hr1G065000.4 | Barley | cytosol | 33.75 | 25.08 |
| HORVU7Hr1G097200.3 | Barley | golgi | 37.92 | 24.59 |
| HORVU7Hr1G109810.1 | Barley | golgi | 37.08 | 23.55 |
| HORVU6Hr1G030990.4 | Barley | golgi | 37.5 | 23.08 |
| HORVU0Hr1G039960.6 | Barley | golgi | 22.5 | 20.77 |
| CDX73017 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G085260.1 | EnsemblPlantsGene:HORVU1Hr1G085260 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0008375 |
| GO:GO:0016020 | GO:GO:0016740 | InterPro:Glyco_trans_14 | PANTHER:PTHR31042 | PANTHER:PTHR31042:SF7 | PFAM:PF02485 |
| SEG:seg | UniParc:UPI000B475F68 | UniProt:A0A287GKC3 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chrchr1H:-:535280022..535281899
Molecular Weight (calculated)
28052.8 Da
IEP (calculated)
9.337
GRAVY (calculated)
-0.234
Length
240 amino acids
Sequence
(BLAST)
(BLAST)
001: MIHCYRELVV FCNHTYSLNM LALLHKQEVK WGHISMVEAE RRLLAHALLD HSNARFILLS ESHVPLFDFP TVYSYIINST KVYMESYDEP GGTGRGRYKR
101: GMAPTITPWQ WRKGSQWFDL DRALAVDVVA DDVYFPVFRK FCKRNCYTDE HYLPTFLHIR HPEAAAGRTV TWVDWSHGGP HPSRFTRMEV TVDFLRWLRG
201: GTTCEYNGRT TTVCFLFARK FLPNSLTRFL RFAPKVMGFG
101: GMAPTITPWQ WRKGSQWFDL DRALAVDVVA DDVYFPVFRK FCKRNCYTDE HYLPTFLHIR HPEAAAGRTV TWVDWSHGGP HPSRFTRMEV TVDFLRWLRG
201: GTTCEYNGRT TTVCFLFARK FLPNSLTRFL RFAPKVMGFG
001: MKNQKDQNSS SLSSSSPSLT TKLLNAQYHH FLNLLSYSLI LCCGIIIGIL LHSSLQNFSS NSSLSIQRIS QLFIVSSLPP SPPPPPPPSP PSEPEQNGLK
101: SFIEPPEKLM HDMEDEELLW RASMAPKIKN YPFPRTPKVA FMFMTKGHLP LARLWERFFR GHEGLFTIYV HSYPSYNQSD PEDSVFRGRH IPSKRVDWGY
201: VNMVEAEQRL LANALLDISN ERFVLLSESC IPLFNFTTVY SYLINSTQTH VESYDQLGGV GRGRYSPLMQ PHVQLRHWRK GSQWIEVDRA MALEIISDRI
301: YWPLFYSYCH HGCYADEHYI PTLLNIKSSL KRRNSNRTLT WVDWSKGGPH PNRFIRHEVT AEFMENLRSG GECLYNGEET NICYLFARKF LPTALDRLLR
401: LSRTVLHF
101: SFIEPPEKLM HDMEDEELLW RASMAPKIKN YPFPRTPKVA FMFMTKGHLP LARLWERFFR GHEGLFTIYV HSYPSYNQSD PEDSVFRGRH IPSKRVDWGY
201: VNMVEAEQRL LANALLDISN ERFVLLSESC IPLFNFTTVY SYLINSTQTH VESYDQLGGV GRGRYSPLMQ PHVQLRHWRK GSQWIEVDRA MALEIISDRI
301: YWPLFYSYCH HGCYADEHYI PTLLNIKSSL KRRNSNRTLT WVDWSKGGPH PNRFIRHEVT AEFMENLRSG GECLYNGEET NICYLFARKF LPTALDRLLR
401: LSRTVLHF
Arabidopsis Description
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9M9C4]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.