Factsheet for Zm00001d053393_P002

Subcellular Localization

min:

: max

Winner_takes_all: golgi, plastid

Predictor Summary:

plastid 2
mitochondrion 3
golgi 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d016103_P001	Maize	golgi, plasma membrane, plastid	80.85	81.39
OQU84731	Sorghum	plastid	81.96	76.67
TraesCS1D01G394500.1	Wheat	mitochondrion	49.22	75.68
HORVU1Hr1G085260.1	Barley	cytosol	38.98	72.92
Os02t0327500-01	Rice	golgi	60.58	61.96
VIT_17s0000g03400.t01	Wine grape	cytosol	39.64	60.14
GSMUA_Achr6P09800_001	Banana	cytosol	36.75	59.35
VIT_17s0000g03410.t01	Wine grape	cytosol	38.98	59.32
TraesCS1B01G413900.1	Wheat	golgi, mitochondrion	60.13	58.19
TraesCS1A01G386500.1	Wheat	golgi, mitochondrion	59.69	57.39
PGSC0003DMT400037735	Potato	cytosol	26.06	56.8
PGSC0003DMT400014396	Potato	cytosol	35.86	54.39
HORVU1Hr1G085240.4	Barley	golgi, mitochondrion, plastid	51.89	49.57
KRH41690	Soybean	golgi	39.42	47.58
CDX73016	Canola	mitochondrion	36.75	47.55
Bra015963.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	36.75	47.14
KRH60391	Soybean	golgi, plastid	39.2	46.81
VIT_01s0011g03850.t01	Wine grape	golgi, plastid	41.2	45.68
PGSC0003DMT400037733	Potato	golgi	38.31	44.68
Zm00001d033892_P001	Maize	endoplasmic reticulum, golgi, plasma membrane	35.86	44.11
Solyc05g009120.2.1	Tomato	nucleus	38.08	43.85
Solyc12g036400.1.1	Tomato	extracellular	39.64	43.2
Zm00001d031187_P002	Maize	plastid	38.08	42.96
PGSC0003DMT400013770	Potato	golgi	39.42	42.96
Zm00001d041221_P001	Maize	golgi, mitochondrion, plasma membrane, plastid	37.64	42.68
Solyc05g009110.1.1	Tomato	golgi	36.53	42.6
AT1G73810.1	Thale cress	golgi, nucleus, peroxisome	39.2	42.11
Zm00001d039970_P001	Maize	plastid	34.52	42.01
Zm00001d033891_P001	Maize	cytosol, golgi, plasma membrane	37.64	41.94
KRH35920	Soybean	golgi, plasma membrane	38.53	41.69
KRH38159	Soybean	golgi	40.09	41.19
KRG90861	Soybean	golgi, plasma membrane	38.31	40.86
Solyc03g119260.2.1	Tomato	golgi, nucleus, plasma membrane	38.31	40.38
Zm00001d033890_P001	Maize	golgi	37.64	40.14
Zm00001d008568_P001	Maize	golgi	34.3	40.0
Zm00001d035039_P001	Maize	plasma membrane	36.75	39.86
Zm00001d039969_P001	Maize	plasma membrane	35.41	39.45
KRH48513	Soybean	golgi	38.31	38.48
KRH39163	Soybean	golgi	38.53	38.36
Zm00001d026711_P001	Maize	cytosol, golgi, plasma membrane	36.75	37.76
Zm00001d024348_P002	Maize	mitochondrion	28.06	34.05
Zm00001d042652_P001	Maize	golgi, peroxisome, vacuole	32.07	33.49
Zm00001d036482_P001	Maize	plasma membrane	27.84	33.42
Zm00001d015429_P004	Maize	golgi	27.84	33.16
Zm00001d014668_P001	Maize	plasma membrane	27.39	33.06
Zm00001d036668_P004	Maize	plasma membrane	27.62	32.8
Zm00001d002382_P002	Maize	golgi, mitochondrion	28.06	32.56
Zm00001d026261_P001	Maize	golgi, mitochondrion	27.62	32.38
Zm00001d053763_P001	Maize	golgi	27.84	32.22
Zm00001d046936_P002	Maize	golgi	25.61	28.97
Zm00001d043768_P001	Maize	golgi, mitochondrion, plastid	24.94	28.64
Zm00001d009810_P003	Maize	mitochondrion, vacuole	25.39	21.47
CDX73017	Canola	cytosol	0.22	7.14

Protein Annotations

EnsemblPlants:Zm00001d053393_P002	EnsemblPlants:Zm00001d053393_T002	EnsemblPlantsGene:Zm00001d053393	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008375	GO:GO:0016020	GO:GO:0016740	GO:GO:0016757	InterPro:Glyco_trans_14	PANTHER:PTHR31042
PANTHER:PTHR31042:SF7	PFAM:PF02485	ProteinID:AQK59365.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI000221C0DC
UniProt:K7U6C5	MapMan:35.1	:	:	:	:

Description

Core-2/I-branching beta-16-N-acetylglucosaminyltransferase family protein

Coordinates

chr4:+:229056441..229061661

Molecular Weight (calculated)

49386.0 Da

IEP (calculated)

10.329

GRAVY (calculated)

-0.253

Length

449 amino acids

Sequence
(BLAST)

001: MTTTTKNHKQ QQLLHMLPTA AAPPWPVRTK LLLCAALGFA LGVVATASLV NSPSYATSSA AAAALRGGGG ALGLVLPPSA TRNAAQDRRP PPKQAGAARA
101: TVRRSRPEPP AGTGITSAAA PPPSVVGAEG PAAPSATSRV NGGSIVSDSD GDDEELMARA EASAPREVPA GCRVPRVAFL FLARWDLPMA PLWDEFFRGH
201: RGLYNVYVHS DPAFNGSDPP ETSAFYRRRI PSKEVKWGEI SMVEAERRLL AHALLDDHCN ARFVLLSESH VPLFDLPTVH SYLVNSTRLY LESYDQPGAT
301: GRGRYNRRMS PVVAAGQWRK GSQWFDLDRA LATDVVADRV YFPLFRRFCR RRHCYADEHY LPTLLNIVRR PSAGANRSLT WVDWSHGGCH PARFTRMEVT
401: VDFLRWLREG STCTYNGRTT TVCFLFARKF LPNSLTRFLR FAPKVMGFG

Best Arabidopsis Sequence Match ( AT1G10880.1 )
(BLAST)

001: MKKQKITTFV KELNLRMNSK KEPISLRYIH ILGTVVFFSS VSSLVILLAF YLNQRLQTSL FLVEDYHTLS SNPLTSPSLS PPPSPSPRSS GSNIADEELM
101: WRAAMAPRSP MKNETHPKVA FMFLTRWNLP LSPLWEMFFK GHEGFYSIYV HTSPEFTQEP PESSVFYKKR IPSKAVEWGK CSMMDAEKRL ISHALLEPSN
201: ARFVLLSETC IPLFNFTTIY TYLTRSTRSF LGSFDDPRPM GRGRYTPKML PHVSLSDWRK GNQWFEISRR VAAEIVSDRR YYAVFKDHCR PPCYIDEHYL
301: PTLVNKICPE MNSNRTVTWV DWSRGGSHPA RFVRKDIRVG FLDRIRFGSN CSYEGEVTNV CFLFGRKFHV STLEPLMKIA PYLFGI

Arabidopsis Description

Core-2/I-branching beta-1,6-n-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q0WR07]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.