Factsheet for Zm00001d008568_P001

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 1
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 5
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	mitochondrion, plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	mitochondrion
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG31955	Sorghum	golgi	82.08	75.24
Zm00001d039970_P001	Maize	plastid	58.44	60.98
Zm00001d039969_P001	Maize	plasma membrane	60.26	57.57
Zm00001d031187_P002	Maize	plastid	44.16	42.71
Zm00001d041221_P001	Maize	golgi, mitochondrion, plasma membrane, plastid	43.9	42.68
Zm00001d033892_P001	Maize	endoplasmic reticulum, golgi, plasma membrane	38.96	41.1
Zm00001d042652_P001	Maize	golgi, peroxisome, vacuole	43.38	38.84
Zm00001d033891_P001	Maize	cytosol, golgi, plasma membrane	39.22	37.47
Zm00001d035039_P001	Maize	plasma membrane	40.0	37.2
Zm00001d033890_P001	Maize	golgi	40.52	37.05
Zm00001d053393_P002	Maize	golgi, plastid	40.0	34.3
Zm00001d026711_P001	Maize	cytosol, golgi, plasma membrane	38.18	33.64
Zm00001d016103_P001	Maize	golgi, plasma membrane, plastid	38.96	33.63
Zm00001d015429_P004	Maize	golgi	31.69	32.36
Zm00001d024348_P002	Maize	mitochondrion	30.65	31.89
Zm00001d002382_P002	Maize	golgi, mitochondrion	31.95	31.78
Zm00001d036668_P004	Maize	plasma membrane	30.91	31.48
Zm00001d053763_P001	Maize	golgi	31.69	31.44
Zm00001d026261_P001	Maize	golgi, mitochondrion	30.91	31.07
Zm00001d036482_P001	Maize	plasma membrane	30.13	31.02
Zm00001d014668_P001	Maize	plasma membrane	29.09	30.11
Zm00001d046936_P002	Maize	golgi	30.39	29.47
Zm00001d043768_P001	Maize	golgi, mitochondrion, plastid	27.53	27.11
Zm00001d009810_P003	Maize	mitochondrion, vacuole	27.79	20.15

Protein Annotations

EnsemblPlants:Zm00001d008568_P001	EnsemblPlants:Zm00001d008568_T001	EnsemblPlantsGene:Zm00001d008568	EntrezGene:103634802	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0008375	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757
InterPro:Glyco_trans_14	PANTHER:PTHR31042	PANTHER:PTHR31042:SF26	PFAM:PF02485	ProteinID:AQK90184.1	SEG:seg
TMHMM:TMhelix	UniParc:UPI000221D93F	UniProt:K7VPV9	MapMan:35.1	:	:

Description

Core-2/I-branching beta-16-N-acetylglucosaminyltransferase family protein

Coordinates

chr8:+:13199646..13201073

Molecular Weight (calculated)

42861.4 Da

IEP (calculated)

9.427

GRAVY (calculated)

-0.174

Length

385 amino acids

Sequence
(BLAST)

001: MAASHSHLGG KLLKVAPTLL LFSLGFALGM VSNSKFPSLY LSSISRSPSP APPPPAPAPP PLPPQNPEVG MARFLEPRSV THNMTDEELL WWASMTPKVR
101: STPYHRAPKV AFLFLARGDL PLRPLWEKFF AGHQGLYSIY VHTDPSYAGS PPEDSVFYGR MIPSQKTRWG DVSLVAAHRR LLANALLDVG NERFALLSES
201: CIPLYNFTAV YAVLTGTDTS FVDAVVTPAR YSALFAERSN ITAAQWRKGE AWFEMDRALA LEVVSDATYF PTFRERCAGQ RACLMDEHYV PTLLSVLRWP
301: RGANRSLTFV DWDRRRRTGF HPHTHRGEEV TPELVEEIRG GARAGRNCSA YHDGASGVCY VFARKFTPDT LQPLLRLAPR VMGFG

Best Arabidopsis Sequence Match ( AT1G51770.1 )
(BLAST)

001: MKVMVMEMEE CVKENGSSTP KSRVTNQSRA LLPLRLLQIL LLFLVLTLGI SVVSIHMIKF LKIQRLDPVA PITLLSTYNH ESVTLDSFIR PPSNVWHTMN
101: DSELLWRASI EPQRNGYPFR RVPKLAFMFL AKGPLPFAPL WEKFCKGHEG LYSIYVHSLP SYKSDFSRSS VFYRRYIPSQ AVAWGEMSMG EAERRLLANA
201: LLDISNEWFV LLSESCIPLR GFSFIYSYVS ESRYSFMGAA DEEGPDGRGR YRTEMEPEIT LSQWRKGSQW FEINRKLAVE IVQDTTYYPK FKEFCRPPCY
301: VDEHYFPTML SMKHRVLLAN RTLTWTDWSR GGAHPATFGK ADVTESFLKK LTGAKSCLYN DHQSQICYLF ARKFAPSALE PLLQLAPKIL ELGSNISSTR
401: HSWYLF

Arabidopsis Description

Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q1G300]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.