Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- golgi 3
- extracellular 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER93518 | Sorghum | golgi, plasma membrane, plastid | 88.12 | 96.11 |
| TraesCS4B01G062000.1 | Wheat | golgi, plasma membrane, plastid | 79.33 | 85.2 |
| TraesCS4D01G061000.1 | Wheat | golgi, plasma membrane, plastid | 79.1 | 84.95 |
| TraesCS4A01G253400.1 | Wheat | golgi, plasma membrane, plastid | 78.62 | 84.65 |
| HORVU4Hr1G010270.2 | Barley | golgi, peroxisome | 79.1 | 83.25 |
| Zm00001d033892_P001 | Maize | endoplasmic reticulum, golgi, plasma membrane | 71.5 | 82.47 |
| Zm00001d033891_P001 | Maize | cytosol, golgi, plasma membrane | 69.83 | 72.95 |
| PGSC0003DMT400035937 | Potato | mitochondrion | 50.12 | 71.77 |
| VIT_09s0002g02660.t01 | Wine grape | cytosol | 48.46 | 69.39 |
| Os03t0731050-00 | Rice | plastid | 70.31 | 69.16 |
| GSMUA_Achr3P25730_001 | Banana | golgi | 57.96 | 67.97 |
| GSMUA_Achr1P14240_001 | Banana | golgi | 57.01 | 67.04 |
| CDX80552 | Canola | cytosol | 23.99 | 66.01 |
| VIT_04s0008g00690.t01 | Wine grape | golgi, nucleus, plasma membrane, plastid | 58.67 | 64.16 |
| KRH48972 | Soybean | cytosol | 32.3 | 63.85 |
| KRH13326 | Soybean | cytosol | 32.07 | 63.38 |
| KRH05512 | Soybean | nucleus | 56.06 | 61.94 |
| CDX78440 | Canola | cytosol | 47.51 | 61.92 |
| Solyc08g065860.2.1 | Tomato | golgi | 55.82 | 61.68 |
| KRH15500 | Soybean | nucleus | 55.34 | 61.32 |
| AT5G11730.1 | Thale cress | golgi | 55.82 | 60.88 |
| KRH47176 | Soybean | cytosol, golgi, plasma membrane | 55.82 | 60.72 |
| CDX97141 | Canola | golgi | 55.58 | 60.62 |
| CDX97139 | Canola | golgi | 55.58 | 60.62 |
| Bra008941.1-P | Field mustard | golgi | 55.58 | 60.62 |
| CDX69735 | Canola | golgi | 55.34 | 60.36 |
| KRH44223 | Soybean | cytosol, golgi, plasma membrane | 55.34 | 60.21 |
| AT3G21310.1 | Thale cress | golgi | 54.16 | 59.53 |
| CDY51451 | Canola | golgi | 53.21 | 58.79 |
| Bra031273.1-P | Field mustard | golgi | 53.21 | 58.79 |
| AT5G25970.2 | Thale cress | golgi | 53.92 | 58.66 |
| Bra006114.1-P | Field mustard | golgi | 49.64 | 58.38 |
| CDY56916 | Canola | cytosol, golgi, plasma membrane, plastid | 52.49 | 58.01 |
| Bra006113.1-P | Field mustard | golgi | 52.97 | 57.77 |
| CDX70417 | Canola | cytosol | 41.09 | 57.67 |
| Solyc03g121280.2.1 | Tomato | golgi, nucleus, plasma membrane | 52.73 | 57.66 |
| PGSC0003DMT400012489 | Potato | golgi | 51.07 | 57.64 |
| CDX88209 | Canola | golgi | 47.51 | 57.14 |
| CDY43927 | Canola | golgi | 52.73 | 57.07 |
| Bra030418.1-P | Field mustard | golgi | 52.73 | 57.07 |
| CDX87842 | Canola | golgi | 52.73 | 57.07 |
| Bra009874.1-P | Field mustard | golgi | 52.26 | 56.99 |
| PGSC0003DMT400006434 | Potato | golgi, nucleus, plasma membrane | 52.26 | 56.99 |
| Solyc06g062490.2.1 | Tomato | golgi | 49.88 | 56.76 |
| CDX97140 | Canola | golgi | 54.63 | 56.1 |
| CDX78439 | Canola | golgi | 52.97 | 55.61 |
| AT1G51770.1 | Thale cress | golgi | 53.21 | 55.17 |
| Zm00001d031187_P002 | Maize | plastid | 51.07 | 54.02 |
| Zm00001d041221_P001 | Maize | golgi, mitochondrion, plasma membrane, plastid | 49.88 | 53.03 |
| CDX70416 | Canola | golgi | 52.49 | 50.57 |
| Zm00001d035039_P001 | Maize | plasma membrane | 42.76 | 43.48 |
| Zm00001d039970_P001 | Maize | plastid | 36.58 | 41.73 |
| Zm00001d026711_P001 | Maize | cytosol, golgi, plasma membrane | 43.23 | 41.65 |
| Zm00001d039969_P001 | Maize | plasma membrane | 39.19 | 40.94 |
| Zm00001d008568_P001 | Maize | golgi | 37.05 | 40.52 |
| Zm00001d024348_P002 | Maize | mitochondrion | 35.15 | 40.0 |
| Zm00001d042652_P001 | Maize | golgi, peroxisome, vacuole | 40.38 | 39.53 |
| Zm00001d036482_P001 | Maize | plasma membrane | 34.44 | 38.77 |
| Zm00001d002382_P002 | Maize | golgi, mitochondrion | 35.63 | 38.76 |
| Zm00001d014668_P001 | Maize | plasma membrane | 34.2 | 38.71 |
| Zm00001d026261_P001 | Maize | golgi, mitochondrion | 34.68 | 38.12 |
| Zm00001d053393_P002 | Maize | golgi, plastid | 40.14 | 37.64 |
| Zm00001d016103_P001 | Maize | golgi, plasma membrane, plastid | 39.43 | 37.22 |
| Zm00001d015429_P004 | Maize | golgi | 33.02 | 36.87 |
| Zm00001d053763_P001 | Maize | golgi | 33.97 | 36.86 |
| Zm00001d036668_P004 | Maize | plasma membrane | 32.78 | 36.51 |
| Zm00001d046936_P002 | Maize | golgi | 31.12 | 33.0 |
| Zm00001d043768_P001 | Maize | golgi, mitochondrion, plastid | 27.08 | 29.16 |
| Zm00001d009810_P003 | Maize | mitochondrion, vacuole | 28.74 | 22.79 |
Protein Annotations
| MapMan:35.1 | UniProt:A0A1D6L344 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0008375 |
| GO:GO:0016020 | GO:GO:0016740 | GO:GO:0016757 | InterPro:Glyco_trans_14 | ProteinID:ONM08881.1 | PFAM:PF02485 |
| PANTHER:PTHR31042 | PANTHER:PTHR31042:SF54 | TMHMM:TMhelix | UniParc:UPI000844E549 | EnsemblPlantsGene:Zm00001d033890 | EnsemblPlants:Zm00001d033890_P001 |
| EnsemblPlants:Zm00001d033890_T001 | SEG:seg | : | : | : | : |
Description
Core-2/I-branching beta-16-N-acetylglucosaminyltransferase family protein
Coordinates
chr1:+:277601212..277604035
Molecular Weight (calculated)
48517.2 Da
IEP (calculated)
8.307
GRAVY (calculated)
-0.219
Length
421 amino acids
Sequence
(BLAST)
(BLAST)
001: MQARVASMED VKEARQAAMA AGQGRVLPSG MLKVFLGFLL LAVGLSAVGM YMARHAVAAA APALFRPCLS GSSAEEEPEG LERWTRPPAR VEHAMTDQEL
101: LWRASFAPRV RGYPFRRVPK VAFMFLTRGP LPLAPLWERF FRGHEGRYSI YVHALPSYHA NFTSESVFYR RQIPSKMRCY PKDITDTNLA FVESVSDFAR
201: DWFLCYVYVA EWGQMTMCDA ERRLLANALL DISNEWFVLV SESCIPIFDF NTTYRYFRNS NQSFLMAFDD PGPYGRGRYN WNMTPEVELD QWRKGSQWFE
301: VHRELAIEIV KDTVYYPKFK EFCRPHCYVD EHYFPTMLTI EAPNRLANRS VTWVDWSRGG AHPATFGRGD ITLEFLRRVR EGRTCLHNNQ NSTMCFLFAR
401: KFAPSTLEPL LELAPTVLGF G
101: LWRASFAPRV RGYPFRRVPK VAFMFLTRGP LPLAPLWERF FRGHEGRYSI YVHALPSYHA NFTSESVFYR RQIPSKMRCY PKDITDTNLA FVESVSDFAR
201: DWFLCYVYVA EWGQMTMCDA ERRLLANALL DISNEWFVLV SESCIPIFDF NTTYRYFRNS NQSFLMAFDD PGPYGRGRYN WNMTPEVELD QWRKGSQWFE
301: VHRELAIEIV KDTVYYPKFK EFCRPHCYVD EHYFPTMLTI EAPNRLANRS VTWVDWSRGG AHPATFGRGD ITLEFLRRVR EGRTCLHNNQ NSTMCFLFAR
401: KFAPSTLEPL LELAPTVLGF G
001: MQNRIVQLEE GKENGITVRS GHYKGFPSKL LLLLGLFLTF SVTVFIISVS TIKYTGIQSV VTTVTSSFVP CREGEPNSLS KWIQPPAVLM HNMSDEELLW
101: RASFWPRRKE YPFKRVPKVA FMFLTKGPLP LASLWERFLK GHKGLYSVYL HPHPSFTAKF PASSVFHRRQ IPSQVAEWGR MSMCDAEKRL LANALLDVSN
201: EWFVLVSESC IPLYNFTTIY SYLSRSKHSF MGAFDDPGPF GRGRYNGNME PEVPLTKWRK GSQWFEVNRD LAATIVKDTL YYPKFKEFCR PACYVDEHYF
301: PTMLTIEKPT VLANRSLTWV DWSRGGPHPA TFGRSDITEN FFGKIFDGRN CSYNGRNTSM CYLFARKFAP SALEPLLHIA PKILGF
101: RASFWPRRKE YPFKRVPKVA FMFLTKGPLP LASLWERFLK GHKGLYSVYL HPHPSFTAKF PASSVFHRRQ IPSQVAEWGR MSMCDAEKRL LANALLDVSN
201: EWFVLVSESC IPLYNFTTIY SYLSRSKHSF MGAFDDPGPF GRGRYNGNME PEVPLTKWRK GSQWFEVNRD LAATIVKDTL YYPKFKEFCR PACYVDEHYF
301: PTMLTIEKPT VLANRSLTWV DWSRGGPHPA TFGRSDITEN FFGKIFDGRN CSYNGRNTSM CYLFARKFAP SALEPLLHIA PKILGF
Arabidopsis Description
At5g11730 [Source:UniProtKB/TrEMBL;Acc:Q9LYF7]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.