Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 3
- plastid 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400035937 | Potato | mitochondrion | 74.28 | 96.26 |
| VIT_04s0008g00690.t01 | Wine grape | golgi, nucleus, plasma membrane, plastid | 71.13 | 70.39 |
| KRH05512 | Soybean | nucleus | 70.34 | 70.34 |
| KRH15500 | Soybean | nucleus | 68.77 | 68.95 |
| Solyc06g062490.2.1 | Tomato | golgi | 60.63 | 62.43 |
| Solyc03g121280.2.1 | Tomato | golgi, nucleus, plasma membrane | 62.73 | 62.08 |
| EER93518 | Sorghum | golgi, plasma membrane, plastid | 62.47 | 61.66 |
| GSMUA_Achr1P14240_001 | Banana | golgi | 57.74 | 61.45 |
| GSMUA_Achr3P25730_001 | Banana | golgi | 56.96 | 60.45 |
| Zm00001d033892_P001 | Maize | endoplasmic reticulum, golgi, plasma membrane | 56.96 | 59.45 |
| TraesCS4D01G061000.1 | Wheat | golgi, plasma membrane, plastid | 60.63 | 58.93 |
| TraesCS4A01G253400.1 | Wheat | golgi, plasma membrane, plastid | 60.37 | 58.82 |
| TraesCS4B01G062000.1 | Wheat | golgi, plasma membrane, plastid | 60.37 | 58.67 |
| HORVU4Hr1G010270.2 | Barley | golgi, peroxisome | 60.37 | 57.5 |
| EER93516 | Sorghum | golgi | 56.69 | 56.84 |
| Zm00001d033890_P001 | Maize | golgi | 61.68 | 55.82 |
| EER93517 | Sorghum | golgi, mitochondrion, plasma membrane | 58.79 | 55.72 |
| Zm00001d033891_P001 | Maize | cytosol, golgi, plasma membrane | 57.74 | 54.59 |
| Os03t0731050-00 | Rice | plastid | 59.32 | 52.8 |
| Solyc05g009130.2.1 | Tomato | golgi | 48.56 | 49.33 |
| Solyc01g103150.2.1 | Tomato | golgi | 48.82 | 46.85 |
| Solyc05g009120.2.1 | Tomato | nucleus | 46.19 | 45.13 |
| Solyc12g036400.1.1 | Tomato | extracellular | 46.19 | 42.72 |
| Solyc02g036250.1.1 | Tomato | cytosol | 17.59 | 42.68 |
| Solyc05g009110.1.1 | Tomato | golgi | 42.26 | 41.82 |
| Solyc03g119260.2.1 | Tomato | golgi, nucleus, plasma membrane | 45.14 | 40.38 |
| Solyc07g008940.2.1 | Tomato | golgi | 37.53 | 36.39 |
| Solyc02g086550.2.1 | Tomato | golgi, mitochondrion | 31.76 | 32.35 |
| Solyc02g080970.2.1 | Tomato | plastid | 31.76 | 30.95 |
Protein Annotations
| EnsemblPlants:Solyc08g065860.2.1 | EnsemblPlantsGene:Solyc08g065860.2 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0008375 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | InterPro:Glyco_trans_14 | PANTHER:PTHR31042 | PANTHER:PTHR31042:SF54 |
| PFAM:PF02485 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000276B8A2 | UniProt:K4CLG5 | MapMan:35.1 |
Description
No Description!
Coordinates
chr8:-:54199731..54204450
Molecular Weight (calculated)
44238.8 Da
IEP (calculated)
9.096
GRAVY (calculated)
-0.106
Length
381 amino acids
Sequence
(BLAST)
(BLAST)
001: MVEENKDPLV VPRTNGITRA LPQRLLRLLM LFLFLCFTFS VASIYMIKYF GFHSIVPTIK PSLLPCIEEE SKNLDSWINP PSNLLHTMSD KELLWRASMV
101: PRVKKYPFKR VPKIAFMFLT KGPLPLAPIW ERFFKGHQGF YSIYIHSLPS FEADFPASSV FYKRQIPSQA TEWGKMSMCD AERRLLANAL LDISNEWFVL
201: LSESCIPLYN FNVIYKHISR SKHSFVGAFD DPGPYGRGRY DENMLPEVNV SQWRKGSQWF EMSRKLALFI VEDTIFYPKF AEFCRPACYV DEHYFPTMLT
301: IEASNLLANR SITWVDWSRG GAHPATFGKS DITEEFMKRM LQGQNCTYNN RNTSICYLFA RKFAPSALEP LFLLAPKYLG F
101: PRVKKYPFKR VPKIAFMFLT KGPLPLAPIW ERFFKGHQGF YSIYIHSLPS FEADFPASSV FYKRQIPSQA TEWGKMSMCD AERRLLANAL LDISNEWFVL
201: LSESCIPLYN FNVIYKHISR SKHSFVGAFD DPGPYGRGRY DENMLPEVNV SQWRKGSQWF EMSRKLALFI VEDTIFYPKF AEFCRPACYV DEHYFPTMLT
301: IEASNLLANR SITWVDWSRG GAHPATFGKS DITEEFMKRM LQGQNCTYNN RNTSICYLFA RKFAPSALEP LFLLAPKYLG F
001: MQNRIVQLEE GKENGITVRS GHYKGFPSKL LLLLGLFLTF SVTVFIISVS TIKYTGIQSV VTTVTSSFVP CREGEPNSLS KWIQPPAVLM HNMSDEELLW
101: RASFWPRRKE YPFKRVPKVA FMFLTKGPLP LASLWERFLK GHKGLYSVYL HPHPSFTAKF PASSVFHRRQ IPSQVAEWGR MSMCDAEKRL LANALLDVSN
201: EWFVLVSESC IPLYNFTTIY SYLSRSKHSF MGAFDDPGPF GRGRYNGNME PEVPLTKWRK GSQWFEVNRD LAATIVKDTL YYPKFKEFCR PACYVDEHYF
301: PTMLTIEKPT VLANRSLTWV DWSRGGPHPA TFGRSDITEN FFGKIFDGRN CSYNGRNTSM CYLFARKFAP SALEPLLHIA PKILGF
101: RASFWPRRKE YPFKRVPKVA FMFLTKGPLP LASLWERFLK GHKGLYSVYL HPHPSFTAKF PASSVFHRRQ IPSQVAEWGR MSMCDAEKRL LANALLDVSN
201: EWFVLVSESC IPLYNFTTIY SYLSRSKHSF MGAFDDPGPF GRGRYNGNME PEVPLTKWRK GSQWFEVNRD LAATIVKDTL YYPKFKEFCR PACYVDEHYF
301: PTMLTIEKPT VLANRSLTWV DWSRGGPHPA TFGRSDITEN FFGKIFDGRN CSYNGRNTSM CYLFARKFAP SALEPLLHIA PKILGF
Arabidopsis Description
At5g11730 [Source:UniProtKB/TrEMBL;Acc:Q9LYF7]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.