Factsheet for Solyc05g009110.1.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 2
mitochondrion 2
golgi 5
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	mitochondrion
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400037735	Potato	cytosol	46.23	86.41
Solyc05g009120.2.1	Tomato	nucleus	75.32	74.36
GSMUA_Achr6P09800_001	Banana	cytosol	41.04	56.83
KRH60391	Soybean	golgi, plastid	54.03	55.32
HORVU1Hr1G085260.1	Barley	cytosol	33.77	54.17
KRH41690	Soybean	golgi	51.69	53.49
TraesCS1D01G394500.1	Wheat	mitochondrion	38.7	51.03
KRH48513	Soybean	golgi	57.66	49.66
Bra015963.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	44.68	49.14
CDX73016	Canola	mitochondrion	44.16	48.99
KRH39163	Soybean	golgi	57.14	48.78
Solyc12g036400.1.1	Tomato	extracellular	51.17	47.82
Solyc03g119260.2.1	Tomato	golgi, nucleus, plasma membrane	50.39	45.54
Solyc05g009130.2.1	Tomato	golgi	43.12	44.27
AT1G73810.1	Thale cress	golgi, nucleus, peroxisome	45.97	42.34
Solyc08g065860.2.1	Tomato	golgi	41.82	42.26
Solyc03g121280.2.1	Tomato	golgi, nucleus, plasma membrane	40.78	40.78
Solyc06g062490.2.1	Tomato	golgi	38.44	40.0
Solyc01g103150.2.1	Tomato	golgi	40.52	39.29
Os02t0327500-01	Rice	golgi	43.12	37.81
Solyc02g036250.1.1	Tomato	cytosol	15.06	36.94
Zm00001d016103_P001	Maize	golgi, plasma membrane, plastid	42.6	36.77
Zm00001d053393_P002	Maize	golgi, plastid	42.6	36.53
TraesCS1B01G413900.1	Wheat	golgi, mitochondrion	43.38	35.99
OQU84731	Sorghum	plastid	44.16	35.42
TraesCS1A01G386500.1	Wheat	golgi, mitochondrion	42.86	35.33
Solyc07g008940.2.1	Tomato	golgi	34.03	33.33
HORVU1Hr1G085240.4	Barley	golgi, mitochondrion, plastid	39.48	32.34
Solyc02g080970.2.1	Tomato	plastid	28.05	27.62
Solyc02g086550.2.1	Tomato	golgi, mitochondrion	26.49	27.27
CDX73017	Canola	cytosol	0.52	14.29

Protein Annotations

EnsemblPlants:Solyc05g009110.1.1	EnsemblPlantsGene:Solyc05g009110.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008375
GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042	PANTHER:PTHR31042:SF7
PFAM:PF02485	PFscan:PS51257	SEG:seg	TMHMM:TMhelix	UniParc:UPI000276688F	UniProt:K4BX85
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr5:-:3242444..3243662

Molecular Weight (calculated)

44900.3 Da

IEP (calculated)

9.947

GRAVY (calculated)

-0.350

Length

385 amino acids

Sequence
(BLAST)

001: MKNKNQKFRN LFTIPINMIY LLTFLFFFAC GIICGITFNH YFNNYNVNLF QVINGQFLNC SSLNPQPLSP PPLPRSVLLL PQSLPSPRSV IPRLGLKEYI
101: KPINVEHDMS DEELLWRSSM VPKVKELPFK IHYFFKGHEG FYSIYVHSHP SYNNSNIDES NIFHGRRIPS KEVDWGKVNM VEAEKRLLAN ALLDISNQRF
201: VLLSEACIPL FNFSTIYTHL INSNQNFVET YDLPGPTGRG RYRSQMSPTI THPQWRKGSQ WFQIDRDLAL EVVSDKKYFS VFQKHCMRPC YADEHYLPTF
301: VNMKFKNGNS GRTLTWVDWS KGGPHPARFN RLDITTELLN KLRNESSCKY NGKKTSICHL FARKFTPHAL SRLLMFAPKI MQFNH

Best Arabidopsis Sequence Match ( AT1G68390.1 )
(BLAST)

001: MKNQKDQNSS SLSSSSPSLT TKLLNAQYHH FLNLLSYSLI LCCGIIIGIL LHSSLQNFSS NSSLSIQRIS QLFIVSSLPP SPPPPPPPSP PSEPEQNGLK
101: SFIEPPEKLM HDMEDEELLW RASMAPKIKN YPFPRTPKVA FMFMTKGHLP LARLWERFFR GHEGLFTIYV HSYPSYNQSD PEDSVFRGRH IPSKRVDWGY
201: VNMVEAEQRL LANALLDISN ERFVLLSESC IPLFNFTTVY SYLINSTQTH VESYDQLGGV GRGRYSPLMQ PHVQLRHWRK GSQWIEVDRA MALEIISDRI
301: YWPLFYSYCH HGCYADEHYI PTLLNIKSSL KRRNSNRTLT WVDWSKGGPH PNRFIRHEVT AEFMENLRSG GECLYNGEET NICYLFARKF LPTALDRLLR
401: LSRTVLHF

Arabidopsis Description

Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9M9C4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.