Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- extracellular 5
- golgi 7
- plasma membrane 6
- endoplasmic reticulum 5
- vacuole 5
- cytosol 1
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_01s0011g03840.t01 | Wine grape | cytosol | 58.4 | 73.99 |
| GSMUA_Achr8P31730_001 | Banana | cytosol | 46.4 | 63.5 |
| AT1G10880.1 | Thale cress | golgi | 53.33 | 51.81 |
| Bra019894.1-P | Field mustard | golgi | 52.0 | 51.72 |
| CDY20597 | Canola | golgi | 46.4 | 51.18 |
| CDY19328 | Canola | golgi, mitochondrion | 51.47 | 51.06 |
| Solyc06g062490.2.1 | Tomato | golgi | 48.8 | 49.46 |
| Solyc08g065860.2.1 | Tomato | golgi | 49.33 | 48.56 |
| Solyc03g121280.2.1 | Tomato | golgi, nucleus, plasma membrane | 48.0 | 46.75 |
| Solyc05g009120.2.1 | Tomato | nucleus | 46.4 | 44.62 |
| Solyc05g009110.1.1 | Tomato | golgi | 44.27 | 43.12 |
| Solyc01g103150.2.1 | Tomato | golgi | 45.07 | 42.57 |
| Solyc03g119260.2.1 | Tomato | golgi, nucleus, plasma membrane | 47.47 | 41.78 |
| Solyc12g036400.1.1 | Tomato | extracellular | 45.87 | 41.75 |
| Solyc02g036250.1.1 | Tomato | cytosol | 16.53 | 39.49 |
| Solyc07g008940.2.1 | Tomato | golgi | 34.67 | 33.08 |
| Solyc02g086550.2.1 | Tomato | golgi, mitochondrion | 31.47 | 31.55 |
| Solyc02g080970.2.1 | Tomato | plastid | 32.53 | 31.2 |
| CDX97918 | Canola | golgi | 49.07 | 29.16 |
Protein Annotations
| EnsemblPlants:Solyc05g009130.2.1 | EnsemblPlantsGene:Solyc05g009130.2 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0008375 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | InterPro:Glyco_trans_14 | PANTHER:PTHR31042 | PANTHER:PTHR31042:SF17 |
| PFAM:PF02485 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0002766891 | UniProt:K4BX87 | MapMan:35.1 |
Description
No Description!
Coordinates
chr5:-:3251899..3254638
Molecular Weight (calculated)
43432.5 Da
IEP (calculated)
9.067
GRAVY (calculated)
-0.125
Length
375 amino acids
Sequence
(BLAST)
(BLAST)
001: MSFHLGTTIV LTLFVSFSAL LLGLFINYQF NKIVVYEDFY LPHQSPIYNL SISTHLVCNS SSSDSSSNRT MEELNDVWHS MNDEELMWRA SMVPQIKKYP
101: FNRIPRVAFL FLTRGRLPLA PLWEMFFKGH KGLFSIYIHT SPDFNYEPPP SSVFYKRRIP SQAVQWGRST MIDAERRLLA NALLDISNER FILLSESCIP
201: LFNFTTIYTY LTNSDQSFLG SFDDPRKIGR GRYNKRMYPN ITLFDWRKGS QWFEIHRELA VKIVSDVLYY PVFKNHCVPP CYMDEHYLPT LVNKVCPGLT
301: SNRSVTWVDW SAGGSHPMTF LKKDVTEEFL KSVGSELNCS YNGKMSSICF LFGRKFHPST LQPLLRIAPK LLGFG
101: FNRIPRVAFL FLTRGRLPLA PLWEMFFKGH KGLFSIYIHT SPDFNYEPPP SSVFYKRRIP SQAVQWGRST MIDAERRLLA NALLDISNER FILLSESCIP
201: LFNFTTIYTY LTNSDQSFLG SFDDPRKIGR GRYNKRMYPN ITLFDWRKGS QWFEIHRELA VKIVSDVLYY PVFKNHCVPP CYMDEHYLPT LVNKVCPGLT
301: SNRSVTWVDW SAGGSHPMTF LKKDVTEEFL KSVGSELNCS YNGKMSSICF LFGRKFHPST LQPLLRIAPK LLGFG
001: MKKQKITTFV KELNLRMNSK KEPISLRYIH ILGTVVFFSS VSSLVILLAF YLNQRLQTSL FLVEDYHTLS SNPLTSPSLS PPPSPSPRSS GSNIADEELM
101: WRAAMAPRSP MKNETHPKVA FMFLTRWNLP LSPLWEMFFK GHEGFYSIYV HTSPEFTQEP PESSVFYKKR IPSKAVEWGK CSMMDAEKRL ISHALLEPSN
201: ARFVLLSETC IPLFNFTTIY TYLTRSTRSF LGSFDDPRPM GRGRYTPKML PHVSLSDWRK GNQWFEISRR VAAEIVSDRR YYAVFKDHCR PPCYIDEHYL
301: PTLVNKICPE MNSNRTVTWV DWSRGGSHPA RFVRKDIRVG FLDRIRFGSN CSYEGEVTNV CFLFGRKFHV STLEPLMKIA PYLFGI
101: WRAAMAPRSP MKNETHPKVA FMFLTRWNLP LSPLWEMFFK GHEGFYSIYV HTSPEFTQEP PESSVFYKKR IPSKAVEWGK CSMMDAEKRL ISHALLEPSN
201: ARFVLLSETC IPLFNFTTIY TYLTRSTRSF LGSFDDPRPM GRGRYTPKML PHVSLSDWRK GNQWFEISRR VAAEIVSDRR YYAVFKDHCR PPCYIDEHYL
301: PTLVNKICPE MNSNRTVTWV DWSRGGSHPA RFVRKDIRVG FLDRIRFGSN CSYEGEVTNV CFLFGRKFHV STLEPLMKIA PYLFGI
Arabidopsis Description
Core-2/I-branching beta-1,6-n-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q0WR07]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.