Factsheet for Solyc02g086550.2.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, mitochondrion

Predictor Summary:

plastid 3
mitochondrion 3
golgi 3
extracellular 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	plastid
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400001379	Potato	mitochondrion	95.19	84.96
VIT_14s0066g00820.t01	Wine grape	cytosol, golgi, mitochondrion, plastid	69.79	80.56
KRH56549	Soybean	golgi	68.98	70.88
KRG93228	Soybean	golgi	68.45	69.19
GSMUA_Achr2P14170_001	Banana	mitochondrion	66.04	67.3
CDX69574	Canola	mitochondrion	65.24	66.67
CDY09869	Canola	mitochondrion	65.24	66.67
Bra008752.1-P	Field mustard	mitochondrion	64.97	66.39
AT5G14550.1	Thale cress	mitochondrion	66.58	66.05
EES19116	Sorghum	golgi	62.3	61.15
TraesCS1D01G115700.1	Wheat	golgi	61.23	58.87
TraesCS1A01G114000.1	Wheat	golgi	61.23	58.72
TraesCS1B01G134300.1	Wheat	golgi	61.23	58.72
Os05t0170000-02	Rice	golgi	62.03	58.15
HORVU0Hr1G039960.6	Barley	golgi	37.17	53.46
Solyc02g036250.1.1	Tomato	cytosol	21.93	52.23
Solyc02g080970.2.1	Tomato	plastid	47.06	45.01
Zm00001d009810_P003	Maize	mitochondrion, vacuole	62.3	43.88
Solyc06g062490.2.1	Tomato	golgi	32.89	33.24
Solyc08g065860.2.1	Tomato	golgi	32.35	31.76
Solyc05g009130.2.1	Tomato	golgi	31.55	31.47
Solyc03g121280.2.1	Tomato	golgi, nucleus, plasma membrane	32.35	31.43
Solyc07g008940.2.1	Tomato	golgi	32.62	31.04
Solyc01g103150.2.1	Tomato	golgi	31.28	29.47
Solyc12g036400.1.1	Tomato	extracellular	31.02	28.16
Solyc05g009120.2.1	Tomato	nucleus	28.61	27.44
Solyc03g119260.2.1	Tomato	golgi, nucleus, plasma membrane	30.48	26.76
Solyc05g009110.1.1	Tomato	golgi	27.27	26.49

Protein Annotations

EnsemblPlants:Solyc02g086550.2.1	EnsemblPlantsGene:Solyc02g086550.2	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008375
GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042	PANTHER:PTHR31042:SF6
PFAM:PF02485	TMHMM:TMhelix	UniParc:UPI0002767984	UniProt:K4BBG3	MapMan:35.1	:

Description

No Description!

Coordinates

chr2:-:49213928..49220120

Molecular Weight (calculated)

43964.4 Da

IEP (calculated)

9.744

GRAVY (calculated)

-0.323

Length

374 amino acids

Sequence
(BLAST)

001: MGLKLIRRSN SQKSQHRWKI KVFAMMLFVF FFGTLVLMET QYNKIRMLAL LSAPQLQNPK IAFLFIARNR LPLDIVWDAF FQGDKENRFS ILVHSRPGFL
101: LNKVTTRSAY FLNRQMNDSI QVDWGEASMI QAERILLQHA LMDPLNERFV FLSDSCIPLY NFSYTYDYIM STPNSFVDSF ADTKEGRYNP KMHPIIPVQS
201: WRKGSQWAVL NRKHADIVVK DEILFPMFQL HCKKKPLPEF WRDQYVPPDT SKIHNCIPDE HYVQTLLAHE GLEGEITRRT LTHTAWLILS SKERERKGWH
301: PVTYKLADAT PMLIQSIKDI DNINYETEHR REWCTSKEKP APCFLFARKF TRPAALRLLN MSALGLHHEE INNV

Best Arabidopsis Sequence Match ( AT5G14550.1 )
(BLAST)

001: MKKKVSQQKL LYRWKRKVYA TLMFAFCFGT FVFIQARFAS IQARFNRISA SLDSLKKPRL DQRPQIAFLF IARNRLPLEF VWDAFFKGED GKFSIYVHSR
101: PGFVLNEATT RSKYFLDRQL NDSIQVDWGE STMIEAERVL LRHALRDSFN HRFVFLSDSC IPLYSFSYTY NYIMSTPTSF VDSFADTKDS RYNPRMNPII
201: PVRNWRKGSQ WVVLNRKHAE IVVNDTSVFP MFQQHCRRKS LPEFWRDRPV PAEGWKEHNC IPDEHYVQTL LSQKGVDSEL TRRSLTHSAW DLSSSKSNER
301: RGWHPMTYKF SDATPDLIQS IKGIDNINYE TEYRREWCSS KGKPSPCFLF ARKFTRPAAL RLLRETILLE GKEHDNK

Arabidopsis Description

At5g14550 [Source:UniProtKB/TrEMBL;Acc:B6IDH4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.