Factsheet for GSMUA_Achr2P14170_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
golgi 4
extracellular 2
plasma membrane 2
nucleus 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	extracellular, golgi, nucleus, plasma membrane, plastid
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_14s0066g00820.t01	Wine grape	cytosol, golgi, mitochondrion, plastid	67.85	76.85
KRH56549	Soybean	golgi	67.03	67.58
CDX69574	Canola	mitochondrion	66.76	66.94
CDY09869	Canola	mitochondrion	66.76	66.94
KRG93228	Soybean	golgi	67.3	66.76
Bra008752.1-P	Field mustard	mitochondrion	66.48	66.67
Solyc02g086550.2.1	Tomato	golgi, mitochondrion	67.3	66.04
AT5G14550.1	Thale cress	mitochondrion	67.3	65.52
EES19116	Sorghum	golgi	64.03	61.68
TraesCS1A01G114000.1	Wheat	golgi	64.58	60.77
TraesCS1D01G115700.1	Wheat	golgi	64.31	60.67
TraesCS1B01G134300.1	Wheat	golgi	64.31	60.51
Os05t0170000-02	Rice	golgi	64.58	59.4
PGSC0003DMT400001379	Potato	mitochondrion	65.94	57.76
HORVU0Hr1G039960.6	Barley	golgi	40.05	56.54
GSMUA_Achr9P21910_001	Banana	golgi	47.41	45.08
GSMUA_Achr3P28930_001	Banana	golgi	46.87	44.91
Zm00001d009810_P003	Maize	mitochondrion, vacuole	64.31	44.44
GSMUA_Achr7P08690_001	Banana	endoplasmic reticulum, golgi	31.06	38.51
GSMUA_Achr10P...	Banana	cytosol	29.43	38.43
GSMUA_Achr8P31730_001	Banana	cytosol	28.07	37.59
GSMUA_Achr11P...	Banana	cytosol	29.7	37.46
GSMUA_Achr6P09800_001	Banana	cytosol	28.34	37.41
GSMUA_Achr7P23520_001	Banana	cytosol	29.97	37.29
GSMUA_Achr8P29190_001	Banana	cytosol	27.52	37.0
GSMUA_Achr1P04590_001	Banana	cytosol	29.43	35.64
GSMUA_Achr1P04580_001	Banana	cytosol	28.07	34.8
GSMUA_Achr5P24160_001	Banana	mitochondrion	30.79	32.19
GSMUA_Achr1P14240_001	Banana	golgi	30.79	31.56
GSMUA_Achr4P12520_001	Banana	golgi	33.52	31.46
GSMUA_Achr4P05750_001	Banana	golgi	32.43	30.43
GSMUA_Achr5P01370_001	Banana	golgi	29.43	29.51
GSMUA_Achr3P25730_001	Banana	golgi	28.34	28.97
GSMUA_Achr8P08460_001	Banana	golgi	27.52	27.82
GSMUA_Achr8P32350_001	Banana	golgi, mitochondrion	28.88	26.63

Protein Annotations

EnsemblPlants:GSMUA_Achr2P14170_001	EnsemblPlants:GSMUA_Achr2T14170_001	EnsemblPlantsGene:GSMUA_Achr2G14170_001	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008375	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042
PANTHER:PTHR31042:SF6	PFAM:PF02485	SEG:seg	TMHMM:TMhelix	UniParc:UPI000294A934	UniProt:M0S7V8
MapMan:35.1	:	:	:	:	:

Description

DNA binding protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr2G14170_001]

Coordinates

chr2:-:16021759..16030728

Molecular Weight (calculated)

43100.8 Da

IEP (calculated)

10.104

GRAVY (calculated)

-0.382

Length

367 amino acids

Sequence
(BLAST)

001: MKRRNFLQQQ RSSRWRIKAL VVVLLLTTCF LLILNHYHYS RIFTFGAPEA PPLVVVQKPK IAFLFIARNR LPLDFVWDAF FQGEKEGKFS IFVHSRPGFL
101: LNEVTTRSAY FSGRQVNNSI QVEWGEASMI EAERILLRNA LKDSSNHRFL FLSDSCIPLY NFSYTYHYIM STSTSFIDSF ADTKQGRYNP KMNPVIPVYN
201: WRKGSQWVVL TRKHAAVMVN DDTVFPEFER HCRRRSLPEF WRDHPLPTDG SKEHNCIPDE HYVQTLIAHK GLEGEITRRT LTHTLWDLSS SKDRERRGWH
301: PVTYKLSDAT PTLIQNIKGI DNVYYETEYR REWCRSKGQP STCFLFARKF TRAAVMRLLN TSAIILN

Best Arabidopsis Sequence Match ( AT5G14550.1 )
(BLAST)

001: MKKKVSQQKL LYRWKRKVYA TLMFAFCFGT FVFIQARFAS IQARFNRISA SLDSLKKPRL DQRPQIAFLF IARNRLPLEF VWDAFFKGED GKFSIYVHSR
101: PGFVLNEATT RSKYFLDRQL NDSIQVDWGE STMIEAERVL LRHALRDSFN HRFVFLSDSC IPLYSFSYTY NYIMSTPTSF VDSFADTKDS RYNPRMNPII
201: PVRNWRKGSQ WVVLNRKHAE IVVNDTSVFP MFQQHCRRKS LPEFWRDRPV PAEGWKEHNC IPDEHYVQTL LSQKGVDSEL TRRSLTHSAW DLSSSKSNER
301: RGWHPMTYKF SDATPDLIQS IKGIDNINYE TEYRREWCSS KGKPSPCFLF ARKFTRPAAL RLLRETILLE GKEHDNK

Arabidopsis Description

At5g14550 [Source:UniProtKB/TrEMBL;Acc:B6IDH4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.