Factsheet for GSMUA_Achr10P23330_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P08690_001	Banana	endoplasmic reticulum, golgi	78.65	74.66
GSMUA_Achr11P...	Banana	cytosol	76.87	74.23
GSMUA_Achr5P24160_001	Banana	mitochondrion	86.12	68.95
GSMUA_Achr4P12520_001	Banana	golgi	81.85	58.82
GSMUA_Achr4P05750_001	Banana	golgi	79.36	57.03
GSMUA_Achr8P29190_001	Banana	cytosol	40.57	41.76
GSMUA_Achr6P09800_001	Banana	cytosol	41.28	41.73
GSMUA_Achr8P31730_001	Banana	cytosol	40.57	41.61
GSMUA_Achr7P23520_001	Banana	cytosol	41.99	40.0
GSMUA_Achr1P04580_001	Banana	cytosol	38.79	36.82
GSMUA_Achr1P04590_001	Banana	cytosol	39.15	36.3
GSMUA_Achr1P14240_001	Banana	golgi	40.21	31.56
GSMUA_Achr3P25730_001	Banana	golgi	39.86	31.2
GSMUA_Achr8P08460_001	Banana	golgi	40.21	31.13
GSMUA_Achr2P14170_001	Banana	mitochondrion	38.43	29.43
GSMUA_Achr5P01370_001	Banana	golgi	37.01	28.42
GSMUA_Achr9P21910_001	Banana	golgi	37.01	26.94
GSMUA_Achr8P32350_001	Banana	golgi, mitochondrion	37.72	26.63
GSMUA_Achr3P28930_001	Banana	golgi	35.23	25.85

Protein Annotations

EnsemblPlants:GSMUA_Achr10P23330_001	EnsemblPlants:GSMUA_Achr10T23330_001	EnsemblPlantsGene:GSMUA_Achr10G23330_001	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008375	GO:GO:0016020	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042	PANTHER:PTHR31042:SF29
PFAM:PF02485	UniParc:UPI000294F84B	UniProt:M0RKQ8	MapMan:35.1	:	:

Description

DNA binding protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr10G23330_001]

Coordinates

chr10:+:28149258..28158486

Molecular Weight (calculated)

32557.8 Da

IEP (calculated)

6.947

GRAVY (calculated)

-0.334

Length

281 amino acids

Sequence
(BLAST)

001: MFLTAGSLPF EKLWEKFFLG YEGRFSIYVH ASTEKPVHVS PLFIGTDIHS EKVAWGKISM VEAEKRLLVN ALQDTDNQHF VLLSDSCVPL HNFDYVYNYL
101: TGTNISFIDC FEDPGPHGTG RYSENMLPEI EKEDFRKGAQ WFSIKRQHAL LILADGVYYT KFKLYCRPGM EGRNCYSDEH YLPTLFHMVD PGGIANWSVT
201: HVDWSEGKWH PKAYRTRDVT FELLKNIASI DESIHVTSDS KKVVQKRPCL WNGVKRPCYL FARKFYPEAL DNLMQLYSNS I

Best Arabidopsis Sequence Match ( AT4G31350.2 )
(BLAST)

001: MSESRQRPPF KGPRWIITLV VLVTVVVITA FIYPPRNSVA CYMFSGPGCP LYQQFLFVPT RELTDSEAAA QVVMNEIMNL PQSKTANPKL AFMFLTPGTL
101: PFEPLWEMFF RGHENKFSVY VHASKKSPVH TSSYFVGRDI HSHKVAWGQI SMVDAERRLL AHALVDPDNQ HFILLSDSCV PLFDFNYIYN HLIFANLSFI
201: DCFEDPGPHG SGRYSQHMLP EVEKKDFRKG SQWFSMKRRH AIVVMADSLY YTKFKLYCRP NMEGRNCYAD EHYFPTLFNM IDPDGIANWS VTHVDWSEGK
301: WHPKLYNARD ITPYLIRKIK SIQLAYHVTS DLKKVTTVKP CLWKGEQRPC YLFARKFNPE TLDRLMYLFP NYTSLV

Arabidopsis Description

At4g31350 [Source:UniProtKB/TrEMBL;Acc:Q8GS18]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.