Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- plastid 3
- extracellular 4
- golgi 6
- plasma membrane 4
- endoplasmic reticulum 4
- vacuole 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P28930_001 | Banana | golgi | 74.87 | 75.46 |
| Solyc02g036250.1.1 | Tomato | cytosol | 23.58 | 57.96 |
| HORVU3Hr1G065000.4 | Barley | cytosol | 47.93 | 57.28 |
| VIT_10s0116g00980.t01 | Wine grape | golgi | 55.44 | 56.32 |
| Os01t0695200-01 | Rice | plastid | 51.81 | 55.1 |
| PGSC0003DMT400042390 | Potato | golgi | 52.59 | 54.13 |
| Bra034487.1-P | Field mustard | mitochondrion | 51.81 | 53.62 |
| CDY24895 | Canola | mitochondrion | 51.81 | 53.62 |
| Zm00001d043768_P001 | Maize | golgi, mitochondrion, plastid | 54.15 | 53.45 |
| PGSC0003DMT400055283 | Potato | golgi | 51.3 | 53.23 |
| KRH11480 | Soybean | mitochondrion | 51.81 | 53.05 |
| CDY08638 | Canola | mitochondrion | 51.81 | 52.77 |
| KXG33181 | Sorghum | golgi, mitochondrion, plastid | 53.37 | 52.69 |
| Solyc02g080970.2.1 | Tomato | plastid | 53.11 | 52.43 |
| TraesCS3D01G258800.1 | Wheat | golgi, mitochondrion, plastid | 53.37 | 52.28 |
| TraesCS3A01G258700.1 | Wheat | golgi, mitochondrion, plastid | 53.11 | 52.16 |
| CDY31228 | Canola | golgi | 49.74 | 51.89 |
| AT1G62305.1 | Thale cress | golgi | 50.26 | 51.32 |
| Bra016802.1-P | Field mustard | golgi | 48.96 | 50.27 |
| CDY21023 | Canola | golgi | 48.96 | 50.27 |
| AT1G11940.1 | Thale cress | golgi | 49.74 | 50.13 |
| TraesCS3B01G291600.1 | Wheat | plastid | 53.11 | 49.52 |
| KRH36494 | Soybean | mitochondrion | 52.59 | 48.22 |
| GSMUA_Achr2P14170_001 | Banana | mitochondrion | 45.08 | 47.41 |
| CDY34605 | Canola | golgi | 45.85 | 46.83 |
| Bra031797.1-P | Field mustard | cytosol | 37.82 | 43.2 |
| GSMUA_Achr8P29190_001 | Banana | cytosol | 27.46 | 38.83 |
| GSMUA_Achr7P08690_001 | Banana | endoplasmic reticulum, golgi | 29.27 | 38.18 |
| GSMUA_Achr11P... | Banana | cytosol | 28.76 | 38.14 |
| GSMUA_Achr6P09800_001 | Banana | cytosol | 27.46 | 38.13 |
| GSMUA_Achr10P... | Banana | cytosol | 26.94 | 37.01 |
| GSMUA_Achr7P23520_001 | Banana | cytosol | 28.24 | 36.95 |
| GSMUA_Achr8P31730_001 | Banana | cytosol | 26.17 | 36.86 |
| GSMUA_Achr1P04590_001 | Banana | cytosol | 28.76 | 36.63 |
| GSMUA_Achr1P04580_001 | Banana | cytosol | 27.98 | 36.49 |
| CDY66259 | Canola | cytosol | 37.82 | 33.95 |
| GSMUA_Achr5P24160_001 | Banana | mitochondrion | 29.53 | 32.48 |
| GSMUA_Achr1P14240_001 | Banana | golgi | 30.05 | 32.4 |
| GSMUA_Achr4P12520_001 | Banana | golgi | 31.87 | 31.46 |
| GSMUA_Achr4P05750_001 | Banana | golgi | 31.35 | 30.95 |
| GSMUA_Achr8P08460_001 | Banana | golgi | 28.76 | 30.58 |
| GSMUA_Achr5P01370_001 | Banana | golgi | 27.72 | 29.23 |
| GSMUA_Achr3P25730_001 | Banana | golgi | 26.17 | 28.13 |
| GSMUA_Achr8P32350_001 | Banana | golgi, mitochondrion | 27.46 | 26.63 |
Protein Annotations
| MapMan:35.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0008375 | GO:GO:0016020 |
| GO:GO:0016740 | EnsemblPlantsGene:GSMUA_Achr9G21910_001 | EnsemblPlants:GSMUA_Achr9P21910_001 | EnsemblPlants:GSMUA_Achr9T21910_001 | InterPro:Glyco_trans_14 | UniProt:M0U2F0 |
| PFAM:PF02485 | PFscan:PS51257 | PANTHER:PTHR31042 | PANTHER:PTHR31042:SF2 | SignalP:SignalP-TM | TMHMM:TMhelix |
| UniParc:UPI000295385C | SEG:seg | : | : | : | : |
Description
DNA binding protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr9G21910_001]
Coordinates
chr9:+:27052984..27060522
Molecular Weight (calculated)
44931.2 Da
IEP (calculated)
9.273
GRAVY (calculated)
-0.187
Length
386 amino acids
Sequence
(BLAST)
(BLAST)
001: MKKRASPPTL WLGLQLILWL SVLACTLALI GIGSRSPSPA ALVEVPFSGT PKIAFLFLAR SNLPLDFLWH AFFQASPSSN ICNAEEDKYS IYIHSEPGFV
101: FDRTTTRSPF FFGRQIQDSI KVVWGEATMI EAERLLFAAA LKDPANRRFA LISDSCVPLY NFSYIYNYVM SSSKSFVDSF LDKREGRYNP KMFPTIPKDR
201: WRKGSQWTIL VRKHAQIVVA DTVVFPEFRR FCKKHILKFY LKRPPFRMNF CLMYVQKEAT QKEHNCIPDE HYMQTLLSMN QLEDELERRT LTYTSWNQSI
301: DAQEKNNWHP KKFEFADASL QHITEIRNIN HIYYETEYRT EWCQCNVIFV PCFLFARKFS RSAAMRILKE GLIGPFDAGA VLFTSS
101: FDRTTTRSPF FFGRQIQDSI KVVWGEATMI EAERLLFAAA LKDPANRRFA LISDSCVPLY NFSYIYNYVM SSSKSFVDSF LDKREGRYNP KMFPTIPKDR
201: WRKGSQWTIL VRKHAQIVVA DTVVFPEFRR FCKKHILKFY LKRPPFRMNF CLMYVQKEAT QKEHNCIPDE HYMQTLLSMN QLEDELERRT LTYTSWNQSI
301: DAQEKNNWHP KKFEFADASL QHITEIRNIN HIYYETEYRT EWCQCNVIFV PCFLFARKFS RSAAMRILKE GLIGPFDAGA VLFTSS
001: MPRLPSSRRG VVWFRWKILI TISTALCILA LFCINRQSNS TATTTTLSSS LSVARSRIPL VKYSGDRPKL AFLFLARRDL PLDFLWDRFF KSADQRNFSI
101: YVHSIPGFVF DESSTRSHFF YNRQLKNSIE VVWGESSMIA AERLLLASAL EDPSNQRFVL LSDSCVPLYD FGYIYRYLVS SPKSFVDSFL DKDNRYTMKM
201: FPVIRKEKWR KGSQWISLIR SHAEVIVNDD TVFPVFQKFC KRSLPLDPRK NWLYLKKRRH NCIPDEHYVQ TLLTMRGLEN EMERRTVTYT TWNLSAKKAE
301: AKSWHPLTFT SDNCGPEEIE GIKKINHVYY ESEYRTEWCR ANSKPVPCFL FARKFTRGAA MRLLSEGLIE SSIDTTTF
101: YVHSIPGFVF DESSTRSHFF YNRQLKNSIE VVWGESSMIA AERLLLASAL EDPSNQRFVL LSDSCVPLYD FGYIYRYLVS SPKSFVDSFL DKDNRYTMKM
201: FPVIRKEKWR KGSQWISLIR SHAEVIVNDD TVFPVFQKFC KRSLPLDPRK NWLYLKKRRH NCIPDEHYVQ TLLTMRGLEN EMERRTVTYT TWNLSAKKAE
301: AKSWHPLTFT SDNCGPEEIE GIKKINHVYY ESEYRTEWCR ANSKPVPCFL FARKFTRGAA MRLLSEGLIE SSIDTTTF
Arabidopsis Description
At1g62305 [Source:UniProtKB/TrEMBL;Acc:Q6DST3]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.