Factsheet for GSMUA_Achr11P08080_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
endoplasmic reticulum 1
plastid 1
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P08690_001	Banana	endoplasmic reticulum, golgi	83.16	81.76
GSMUA_Achr10P...	Banana	cytosol	74.23	76.87
GSMUA_Achr4P12520_001	Banana	golgi	81.79	60.87
GSMUA_Achr4P05750_001	Banana	golgi	81.44	60.61
GSMUA_Achr5P24160_001	Banana	mitochondrion	72.51	60.11
Os06t0661900-01	Rice	golgi	73.54	56.02
Zm00001d015429_P004	Maize	golgi	72.16	55.7
KXG20537	Sorghum	mitochondrion	72.16	55.56
Zm00001d036668_P004	Maize	plasma membrane	71.82	55.29
HORVU7Hr1G109810.1	Barley	golgi	71.82	55.29
TraesCS7D01G476000.1	Wheat	golgi	71.13	54.76
TraesCS7A01G489600.1	Wheat	golgi	71.13	54.76
TraesCS7B01G392700.1	Wheat	golgi	70.45	54.23
Os06t0700500-01	Rice	golgi	69.07	54.03
EES04616	Sorghum	golgi	71.13	53.63
Zm00001d053763_P001	Maize	golgi	71.48	53.61
KXG20769	Sorghum	golgi	68.38	53.49
Zm00001d036482_P001	Maize	plasma membrane	68.73	53.48
TraesCS7B01G320800.1	Wheat	golgi	67.35	52.97
TraesCS7A01G419900.1	Wheat	golgi	67.35	52.97
TraesCS7D01G412700.1	Wheat	golgi	67.35	52.97
HORVU7Hr1G097200.3	Barley	golgi	67.35	52.97
Zm00001d014668_P001	Maize	plasma membrane	67.01	52.42
Os02t0175500-01	Rice	golgi	69.76	52.05
Zm00001d046936_P002	Maize	golgi	68.04	49.87
TraesCS6A01G154200.1	Wheat	golgi	66.67	49.74
TraesCS6B01G181900.1	Wheat	golgi	66.67	49.74
TraesCS6D01G143800.1	Wheat	golgi	66.32	49.49
HORVU6Hr1G030990.4	Barley	golgi	65.98	49.23
GSMUA_Achr8P29190_001	Banana	cytosol	41.24	43.96
GSMUA_Achr6P09800_001	Banana	cytosol	40.89	42.81
GSMUA_Achr7P23520_001	Banana	cytosol	41.58	41.02
GSMUA_Achr8P31730_001	Banana	cytosol	37.8	40.15
GSMUA_Achr1P04580_001	Banana	cytosol	36.77	36.15
GSMUA_Achr1P04590_001	Banana	cytosol	36.43	34.98
GSMUA_Achr8P08460_001	Banana	golgi	39.52	31.68
GSMUA_Achr1P14240_001	Banana	golgi	38.83	31.56
GSMUA_Achr3P25730_001	Banana	golgi	38.14	30.92
GSMUA_Achr2P14170_001	Banana	mitochondrion	37.46	29.7
GSMUA_Achr5P01370_001	Banana	golgi	36.77	29.23
GSMUA_Achr9P21910_001	Banana	golgi	38.14	28.76
GSMUA_Achr8P32350_001	Banana	golgi, mitochondrion	38.83	28.39
GSMUA_Achr3P28930_001	Banana	golgi	36.77	27.94

Protein Annotations

EnsemblPlants:GSMUA_Achr11P08080_001	EnsemblPlants:GSMUA_Achr11T08080_001	EnsemblPlantsGene:GSMUA_Achr11G08080_001	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008375	GO:GO:0016020	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042	PANTHER:PTHR31042:SF29
PFAM:PF02485	UniParc:UPI0002964CBD	UniProt:M0RQD8	MapMan:35.1	:	:

Description

DNA binding protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr11G08080_001]

Coordinates

chr11:+:6260459..6267350

Molecular Weight (calculated)

34166.0 Da

IEP (calculated)

8.438

GRAVY (calculated)

-0.344

Length

291 amino acids

Sequence
(BLAST)

001: MFLTRGSLPF EKLWETFFLL WLNLRLQGHE GRYSIYVHAS QEKPVHVSPL FVGRGIRSTK VIWGKISMVE AEKRLLANAL HNPDNQQFIL LSDSCVPLHN
101: FDYVYNYLLG TNVSFIDSFW DPGPHGNARY TEHMSPEIEE KDFRKGAQWF TMKRKHALIV MADNLYFTKF RLYCKPGFDG RNCYADEHYL PTLFNMIDPT
201: GIANWSVTHV DWSEGKWHPK AYQAKEVTYE LLKNITSIDE NYHVTSDDKK VKTVSPCLWN GMKRPCYLFA RKFLPETLDN LMQLFSIYRV I

Best Arabidopsis Sequence Match ( AT2G19160.2 )
(BLAST)

001: MKAIKGWRLG KINYMQSLPG ARHRAPTRKP IWIIAVLSLI AMFVIGAYMF PHHSKAACYM FSSKGCKGLT DWLPPSLREY SDDEIAARVV ISEILSSPRV
101: IKKSSKIAFM FLTPGTLPFE KLWDLFFQGH EGKFSVYIHA SKDTPVHTSR YFLNREIRSD EVVWGRISMI DAERRLLTNA LRDPENQQFV LLSDSCVPLR
201: SFEYMYNYMM HSNVSYVDCF DDPGPHGTGR HMDHMLPEIP REDFRKGAQW FSMKRQHAVV TVADNLYYSK FRDYCGPGVE GNKNCIADEH YLPTFFYMLD
301: PTGIANWTVT YVDWSERKWH PRKYMPEDIT LELIKNISSI DAVSRVTSEK NGVVSWTHCM WNGIKRPCYL FGRKFHADTL DKLMELFPNY TSIV

Arabidopsis Description

At2g19160 [Source:UniProtKB/TrEMBL;Acc:Q8W460]
SUBAcon: [mitochondrion,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.