Factsheet for GSMUA_Achr8P32350_001

Subcellular Localization

min:

: max

Winner_takes_all: golgi, mitochondrion

Predictor Summary:

plastid 2
golgi 3
extracellular 2
plasma membrane 2
endoplasmic reticulum 1
vacuole 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
MultiLoc:	golgi
Plant-mPloc:	extracellular, plasma membrane, plastid
Predotar:	mitochondrion
PProwler:	secretory
WoLF PSORT:	mitochondrion
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P23520_001	Banana	cytosol	56.78	76.61
GSMUA_Achr8P08460_001	Banana	golgi	66.08	72.45
GSMUA_Achr5P01370_001	Banana	golgi	65.33	71.04
GSMUA_Achr8P29190_001	Banana	cytosol	47.99	69.96
TraesCS7A01G320800.1	Wheat	cytosol, golgi, peroxisome	62.56	61.48
TraesCS7B01G221700.1	Wheat	cytosol, golgi, peroxisome	62.31	61.23
TraesCS7D01G317600.1	Wheat	cytosol, golgi, peroxisome	62.31	61.23
HORVU7Hr1G076790.5	Barley	golgi	62.31	60.64
Os08t0110400-01	Rice	cytosol, golgi, peroxisome	61.81	60.44
Zm00001d035039_P001	Maize	plasma membrane	62.56	60.14
EES14395	Sorghum	endoplasmic reticulum, golgi, plastid	62.06	59.95
CDX93443	Canola	golgi	56.28	58.33
VIT_12s0035g01710.t01	Wine grape	golgi	55.53	58.31
CDY31036	Canola	golgi	54.52	57.56
CDX94911	Canola	golgi	55.53	57.4
KRH26270	Soybean	golgi	54.02	56.14
CDY20644	Canola	golgi	54.77	55.9
GSMUA_Achr6P09800_001	Banana	cytosol	38.94	55.76
Bra019951.1-P	Field mustard	endoplasmic reticulum, golgi, plastid	56.78	54.59
KRH06031	Soybean	golgi, plasma membrane, plastid	54.02	54.57
Bra018450.1-P	Field mustard	golgi	55.03	54.21
PGSC0003DMT400063986	Potato	golgi	54.02	54.16
GSMUA_Achr8P31730_001	Banana	cytosol	37.19	54.01
AT1G10280.1	Thale cress	golgi	55.28	53.4
Solyc01g103150.2.1	Tomato	golgi	52.76	52.9
Os04t0272400-01	Rice	golgi, nucleus, peroxisome	53.77	51.94
TraesCS2D01G566600.1	Wheat	cytosol, golgi, plasma membrane	53.27	50.96
TraesCS2B01G616400.1	Wheat	golgi	53.52	50.96
HORVU2Hr1G127680.1	Barley	cytosol, golgi, plasma membrane	52.76	50.36
TraesCSU01G137600.1	Wheat	cytosol, golgi, plasma membrane	53.52	49.88
Zm00001d026711_P001	Maize	cytosol, golgi, plasma membrane	54.27	49.43
EES11719	Sorghum	golgi, mitochondrion, peroxisome	55.28	49.33
GSMUA_Achr1P14240_001	Banana	golgi	43.97	48.88
GSMUA_Achr1P04580_001	Banana	cytosol	34.92	46.96
GSMUA_Achr1P04590_001	Banana	cytosol	35.68	46.86
GSMUA_Achr3P25730_001	Banana	golgi	37.69	41.78
GSMUA_Achr11P...	Banana	cytosol	28.39	38.83
GSMUA_Achr7P08690_001	Banana	endoplasmic reticulum, golgi	28.14	37.84
GSMUA_Achr10P...	Banana	cytosol	26.63	37.72
GSMUA_Achr5P24160_001	Banana	mitochondrion	30.15	34.19
GSMUA_Achr4P12520_001	Banana	golgi	31.66	32.23
GSMUA_Achr4P05750_001	Banana	golgi	31.41	31.97
GSMUA_Achr2P14170_001	Banana	mitochondrion	26.63	28.88
GSMUA_Achr9P21910_001	Banana	golgi	26.63	27.46
GSMUA_Achr3P28930_001	Banana	golgi	26.38	27.42

Protein Annotations

EnsemblPlants:GSMUA_Achr8P32350_001	EnsemblPlants:GSMUA_Achr8T32350_001	EnsemblPlantsGene:GSMUA_Achr8G32350_001	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008375	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042
PANTHER:PTHR31042:SF3	PFAM:PF02485	TMHMM:TMhelix	UniParc:UPI000295E21C	UniProt:M0TVI7	MapMan:35.1

Description

DNA binding protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr8G32350_001]

Coordinates

chr8:-:33782758..33785443

Molecular Weight (calculated)

45955.3 Da

IEP (calculated)

9.002

GRAVY (calculated)

-0.017

Length

398 amino acids

Sequence
(BLAST)

001: MSFLSVSAAR GRRNYRFIGL VDDDSNELVF LRLVVSLFPL VILFGFLVYS FGFSFDHWLA GNSKLFVSFL VIFMAGIIIG LSLSAHFTRS FNSQTDIFFP
101: KTMYTTNCDK ASLSFKGFLS PAHLMHSMSD KELFWRVSMA PKMKEYPFER VPKVAFMFMT RGPLPLARLW DRFFKGHEGL YSVYVHTIPD YKLNAPESSA
201: FYGRQIPSEE VSWGSVTLVD AEKRLLANAL LDFSNERFIL LSESCIPVYN FPTVYEYLIN SAHSFVESYD ENSQQGRGRY SRHMFPTIKL HQWRKGSEWF
301: ELNRELAVNV VADYKYYSIF SKYCKPSCYP DEHYIPTFLN MFHGSLNANR TITWSIRNNG TSCMYNSRPT SVCFLFARKF APSSLDPLLN LTSTVMGF

Best Arabidopsis Sequence Match ( AT1G10280.1 )
(BLAST)

001: MARGGKEEGE KHIGLLKLAQ TLSFLLIFMA GIIIGLAASS HIDRYFNSLP RMFSSTTNLQ SIPFSTPDYS NCTIIHRDCT GNDDNESDDG GVKAEKPKVR
101: DCWSIDGFVR PENLSHGMTD DELFWRASMV PVKEEYPYDR VPKVAFMFLT RGPLPMLPLW EKFFKGNEKY LSVYVHTPPG YDMNVSRDSP FYDRQIPSQR
201: VEWGSPLLTD AEKRLLANAL LDFSNERFVL LSESCVPVYN FSTVYTYLIN SAYSFVDSYD EPTRYGRGRY SRKMLPDIKL HHWRKGSQWF EVNRKIAIYI
301: ISDSKYYSLF KQFCRPACYP DEHYIPTFLN MFHGSMNANR SVTWVDWSIG GPHPATYAAA NITEGFLQSI RKNETDCLYN EEPTSLCFLF ARKFSPSALA
401: PLMNLSSTVL GF

Arabidopsis Description

At1g10280 [Source:UniProtKB/TrEMBL;Acc:Q9SY70]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.