Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G320800.1 | Wheat | cytosol, golgi, peroxisome | 95.35 | 96.3 |
| TraesCS7D01G317600.1 | Wheat | cytosol, golgi, peroxisome | 95.35 | 96.3 |
| TraesCS7B01G221700.1 | Wheat | cytosol, golgi, peroxisome | 94.87 | 95.8 |
| Os08t0110400-01 | Rice | cytosol, golgi, peroxisome | 82.4 | 82.8 |
| EES14395 | Sorghum | endoplasmic reticulum, golgi, plastid | 82.4 | 81.8 |
| Zm00001d035039_P001 | Maize | plasma membrane | 82.4 | 81.4 |
| HORVU2Hr1G127680.1 | Barley | cytosol, golgi, plasma membrane | 65.77 | 64.51 |
| GSMUA_Achr8P32350_001 | Banana | golgi, mitochondrion | 60.64 | 62.31 |
| VIT_12s0035g01710.t01 | Wine grape | golgi | 54.28 | 58.58 |
| KRH26270 | Soybean | golgi | 54.77 | 58.49 |
| CDY31036 | Canola | golgi | 53.06 | 57.56 |
| PGSC0003DMT400063986 | Potato | golgi | 55.5 | 57.18 |
| CDX93443 | Canola | golgi | 53.55 | 57.03 |
| KRH06031 | Soybean | golgi, plasma membrane, plastid | 54.77 | 56.85 |
| CDX94911 | Canola | golgi | 53.06 | 56.36 |
| Solyc01g103150.2.1 | Tomato | golgi | 54.28 | 55.92 |
| CDY20644 | Canola | golgi | 53.3 | 55.9 |
| HORVU3Hr1G081930.2 | Barley | golgi | 53.06 | 55.5 |
| Bra018450.1-P | Field mustard | golgi | 53.79 | 54.46 |
| AT1G10280.1 | Thale cress | golgi | 54.28 | 53.88 |
| Bra019951.1-P | Field mustard | endoplasmic reticulum, golgi, plastid | 54.52 | 53.86 |
| HORVU1Hr1G085260.1 | Barley | cytosol | 29.58 | 50.42 |
| HORVU5Hr1G077980.1 | Barley | cytosol, plastid | 21.27 | 47.54 |
| HORVU4Hr1G010270.2 | Barley | golgi, peroxisome | 43.28 | 44.25 |
| HORVU3Hr1G007160.1 | Barley | cytosol, golgi | 22.0 | 41.67 |
| HORVU5Hr1G001380.1 | Barley | endoplasmic reticulum, golgi, peroxisome, plastid | 40.1 | 40.0 |
| HORVU5Hr1G078030.1 | Barley | cytosol, golgi, peroxisome, plastid | 40.1 | 39.23 |
| HORVU5Hr1G001360.2 | Barley | endoplasmic reticulum, golgi, peroxisome, plastid | 35.7 | 38.62 |
| HORVU2Hr1G100480.3 | Barley | cytosol | 29.83 | 37.54 |
| HORVU7Hr1G097200.3 | Barley | golgi | 32.27 | 35.68 |
| HORVU7Hr1G109810.1 | Barley | golgi | 31.54 | 34.13 |
| HORVU0Hr1G039960.6 | Barley | golgi | 20.54 | 32.31 |
| HORVU3Hr1G065000.4 | Barley | cytosol | 25.43 | 32.2 |
| HORVU6Hr1G030990.4 | Barley | golgi | 30.56 | 32.05 |
| HORVU1Hr1G085240.4 | Barley | golgi, mitochondrion, plastid | 33.5 | 29.15 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G076790.5 | EnsemblPlantsGene:HORVU7Hr1G076790 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0008375 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | InterPro:Glyco_trans_14 | PANTHER:PTHR31042 | PANTHER:PTHR31042:SF3 |
| PFAM:PF02485 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000B46CA31 | UniProt:A0A287WYY0 | MapMan:35.1 |
Description
No Description!
Coordinates
chrchr7H:-:449173843..449175923
Molecular Weight (calculated)
45248.8 Da
IEP (calculated)
8.072
GRAVY (calculated)
-0.231
Length
409 amino acids
Sequence
(BLAST)
(BLAST)
001: MWGDTKPMLX XXXXXXXXXX XGGGGDEDGD YFPNTPRKDW STGLLKLVTA MVIFMAGVVI GLSVSANVSR YYYNSHTELF FPTATYSSCD RRGATGDCGP
101: GFKAFVHPPQ LAHSMTDEEL FWRATLVPTA DEFPFQRVPK VAFLFMTRGP LPFAPLWERF FRGHQGLFSV YLHTIPDYKL NVSKTSPFYG RQIPSEEVSW
201: GSITLVDAEK RLLANALLDF SNERFVLLSE SCIPVFNFPT VYEYLINSEH SFVESYNIDT PQSAGRYNRR MAPHILPEQW RKGSEWFELN RELAVRVVAD
301: LKYYSIFRKH CRPSCYPDEH YIPTYLHLFH GSLNANRTIT WVDWSRGGPH PARYGAGNIN VDFIKAIRNN GTQCLYNSKH TSVCYLFARK FAPSALGPLM
401: NLTSTVLDF
101: GFKAFVHPPQ LAHSMTDEEL FWRATLVPTA DEFPFQRVPK VAFLFMTRGP LPFAPLWERF FRGHQGLFSV YLHTIPDYKL NVSKTSPFYG RQIPSEEVSW
201: GSITLVDAEK RLLANALLDF SNERFVLLSE SCIPVFNFPT VYEYLINSEH SFVESYNIDT PQSAGRYNRR MAPHILPEQW RKGSEWFELN RELAVRVVAD
301: LKYYSIFRKH CRPSCYPDEH YIPTYLHLFH GSLNANRTIT WVDWSRGGPH PARYGAGNIN VDFIKAIRNN GTQCLYNSKH TSVCYLFARK FAPSALGPLM
401: NLTSTVLDF
001: MARGGKEEGE KHIGLLKLAQ TLSFLLIFMA GIIIGLAASS HIDRYFNSLP RMFSSTTNLQ SIPFSTPDYS NCTIIHRDCT GNDDNESDDG GVKAEKPKVR
101: DCWSIDGFVR PENLSHGMTD DELFWRASMV PVKEEYPYDR VPKVAFMFLT RGPLPMLPLW EKFFKGNEKY LSVYVHTPPG YDMNVSRDSP FYDRQIPSQR
201: VEWGSPLLTD AEKRLLANAL LDFSNERFVL LSESCVPVYN FSTVYTYLIN SAYSFVDSYD EPTRYGRGRY SRKMLPDIKL HHWRKGSQWF EVNRKIAIYI
301: ISDSKYYSLF KQFCRPACYP DEHYIPTFLN MFHGSMNANR SVTWVDWSIG GPHPATYAAA NITEGFLQSI RKNETDCLYN EEPTSLCFLF ARKFSPSALA
401: PLMNLSSTVL GF
101: DCWSIDGFVR PENLSHGMTD DELFWRASMV PVKEEYPYDR VPKVAFMFLT RGPLPMLPLW EKFFKGNEKY LSVYVHTPPG YDMNVSRDSP FYDRQIPSQR
201: VEWGSPLLTD AEKRLLANAL LDFSNERFVL LSESCVPVYN FSTVYTYLIN SAYSFVDSYD EPTRYGRGRY SRKMLPDIKL HHWRKGSQWF EVNRKIAIYI
301: ISDSKYYSLF KQFCRPACYP DEHYIPTFLN MFHGSMNANR SVTWVDWSIG GPHPATYAAA NITEGFLQSI RKNETDCLYN EEPTSLCFLF ARKFSPSALA
401: PLMNLSSTVL GF
Arabidopsis Description
At1g10280 [Source:UniProtKB/TrEMBL;Acc:Q9SY70]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.