Factsheet for HORVU6Hr1G030990.4

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

nucleus 2
mitochondrion 2
golgi 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G143800.1	Wheat	golgi	97.69	97.69
TraesCS6A01G154200.1	Wheat	golgi	97.69	97.69
TraesCS6B01G181900.1	Wheat	golgi	96.67	96.67
Zm00001d015429_P004	Maize	golgi	82.05	84.88
EES04616	Sorghum	golgi	81.54	82.38
Zm00001d053763_P001	Maize	golgi	81.79	82.22
Os02t0175500-01	Rice	golgi	81.28	81.28
HORVU7Hr1G109810.1	Barley	golgi	73.08	75.4
GSMUA_Achr7P08690_001	Banana	endoplasmic reticulum, golgi	53.33	70.27
GSMUA_Achr4P05750_001	Banana	golgi	66.41	66.24
GSMUA_Achr11P...	Banana	cytosol	49.23	65.98
GSMUA_Achr4P12520_001	Banana	golgi	65.13	64.96
HORVU2Hr1G100480.3	Barley	cytosol	52.82	63.38
HORVU7Hr1G097200.3	Barley	golgi	56.92	60.0
HORVU5Hr1G077980.1	Barley	cytosol, plastid	18.97	40.44
HORVU3Hr1G007160.1	Barley	cytosol, golgi	21.54	38.89
HORVU1Hr1G085260.1	Barley	cytosol	23.08	37.5
HORVU4Hr1G010270.2	Barley	golgi, peroxisome	37.95	37.0
HORVU3Hr1G081930.2	Barley	golgi	34.62	34.53
HORVU5Hr1G001380.1	Barley	endoplasmic reticulum, golgi, peroxisome, plastid	34.1	32.44
HORVU3Hr1G065000.4	Barley	cytosol	26.67	32.2
HORVU2Hr1G127680.1	Barley	cytosol, golgi, plasma membrane	34.36	32.13
HORVU5Hr1G078030.1	Barley	cytosol, golgi, peroxisome, plastid	33.59	31.34
HORVU5Hr1G001360.2	Barley	endoplasmic reticulum, golgi, peroxisome, plastid	29.74	30.69
HORVU7Hr1G076790.5	Barley	golgi	32.05	30.56
HORVU0Hr1G039960.6	Barley	golgi	20.0	30.0
HORVU1Hr1G085240.4	Barley	golgi, mitochondrion, plastid	27.18	22.55

Protein Annotations

EnsemblPlants:HORVU6Hr1G030990.4	EnsemblPlantsGene:HORVU6Hr1G030990	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008375
GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042	PANTHER:PTHR31042:SF19
PFAM:PF02485	TMHMM:TMhelix	UniParc:UPI000294C659	UniProt:M0XVI9	MapMan:35.1	:

Description

No Description!

Coordinates

chrchr6H:-:130981749..130988847

Molecular Weight (calculated)

45334.0 Da

IEP (calculated)

9.568

GRAVY (calculated)

-0.200

Length

390 amino acids

Sequence
(BLAST)

001: MKVPRVWQRG SKDMTAMPHP RHRTAKKPMW IIVLLSIVCV SLIGAYVYPP RRYSTCYFFA SSVCTPFKDW LPAVTRREPT DQEIFSSVVI RDMLSMPMPM
101: SKNPKIAFMF LTPGSLPFEK LWEKFLQGHE GRYSIYIHAS REKPVHSSPL FVNREIRSEK VVWGRVSMVD AEKRLLGNAL LDIDNQFFVL LSDSCIPLHT
201: FDYIYNYLMG TNVSFVDSFL DPGPHGSGRY SIEMFPEIEH RDFRKGAQWF AITRRHAILI MADNLYYRKF KLYCKPTVGR NCIADEHYLP TLFKIVDPGG
301: ITNYSVTHVD WSEGKWHPRS YRAADITYEL LRNITYFNEI VHIASDETRT VTSTPCILNG RKRPCFLFAR KFYPDAVNNL LKLFPSYTSA

Best Arabidopsis Sequence Match ( AT2G19160.2 )
(BLAST)

001: MKAIKGWRLG KINYMQSLPG ARHRAPTRKP IWIIAVLSLI AMFVIGAYMF PHHSKAACYM FSSKGCKGLT DWLPPSLREY SDDEIAARVV ISEILSSPRV
101: IKKSSKIAFM FLTPGTLPFE KLWDLFFQGH EGKFSVYIHA SKDTPVHTSR YFLNREIRSD EVVWGRISMI DAERRLLTNA LRDPENQQFV LLSDSCVPLR
201: SFEYMYNYMM HSNVSYVDCF DDPGPHGTGR HMDHMLPEIP REDFRKGAQW FSMKRQHAVV TVADNLYYSK FRDYCGPGVE GNKNCIADEH YLPTFFYMLD
301: PTGIANWTVT YVDWSERKWH PRKYMPEDIT LELIKNISSI DAVSRVTSEK NGVVSWTHCM WNGIKRPCYL FGRKFHADTL DKLMELFPNY TSIV

Arabidopsis Description

At2g19160 [Source:UniProtKB/TrEMBL;Acc:Q8W460]
SUBAcon: [mitochondrion,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.