Factsheet for Os02t0175500-01

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

nucleus 1
mitochondrion 3
golgi 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d015429_P004	Maize	golgi	87.44	90.45
EES04616	Sorghum	golgi	89.49	90.41
Zm00001d053763_P001	Maize	golgi	89.49	89.95
TraesCS6D01G143800.1	Wheat	golgi	82.31	82.31
TraesCS6B01G181900.1	Wheat	golgi	82.31	82.31
Os06t0661900-01	Rice	golgi	80.51	82.2
TraesCS6A01G154200.1	Wheat	golgi	81.79	81.79
HORVU6Hr1G030990.4	Barley	golgi	81.28	81.28
GSMUA_Achr7P08690_001	Banana	endoplasmic reticulum, golgi	55.38	72.97
GSMUA_Achr11P...	Banana	cytosol	52.05	69.76
GSMUA_Achr4P05750_001	Banana	golgi	68.72	68.54
GSMUA_Achr4P12520_001	Banana	golgi	67.18	67.01
Os06t0700500-01	Rice	golgi	61.28	64.25
Os08t0225400-01	Rice	cytosol, golgi	62.05	58.6
Os01t0133700-00	Rice	cytosol	21.28	37.56
Os01t0875800-01	Rice	golgi	35.13	35.68
Os12t0635500-01	Rice	golgi, plasma membrane, plastid	34.87	33.42
Os04t0272400-01	Rice	golgi, nucleus, peroxisome	34.1	32.28
Os10t0165000-01	Rice	golgi	32.82	31.68
Os08t0110400-01	Rice	cytosol, golgi, peroxisome	32.56	31.2
Os05t0170000-02	Rice	golgi	31.03	30.33
Os01t0695200-01	Rice	plastid	28.21	30.3
Os03t0731050-00	Rice	plastid	32.31	29.44
Os01t0133600-00	Rice	golgi, mitochondrion, plasma membrane, plastid	31.54	29.43
Os02t0327500-01	Rice	golgi	33.08	29.39

Protein Annotations

EnsemblPlants:Os02t0175500-01	EnsemblPlantsGene:Os02g0175500	EntrezGene:4328471	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008375	GO:GO:0016020	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042	PANTHER:PTHR31042:SF19
PFAM:PF02485	ProteinID:BAD27611.1	ProteinID:BAF07969.1	ProteinID:BAS77247.1	ProteinID:EEE56419.1	RefSeq:XP_015622611.1
TMHMM:TMhelix	UniParc:UPI00003CE46C	UniProt:Q6EUQ8	MapMan:35.1	:	:

Description

Protein of unknown function DUF266, plant family protein. (Os02t0175500-01)

Coordinates

chr2:+:4129142..4133817

Molecular Weight (calculated)

44999.4 Da

IEP (calculated)

8.848

GRAVY (calculated)

-0.224

Length

390 amino acids

Sequence
(BLAST)

001: MKASQVWQRG SKDMTAMPPP RQRGAAKKPM WIIVLLSLVC VALIGAYAYP PRRYSACYFF ASSVCTPFKD WLPTVTRRER TDEEIVSSVV MRDLLAMPMP
101: VSKNPKIALM FLTPGSLPFE KLWEKFLQGH EDRYSIYIHA SRERPVHSSS LFVGREIHSE KVVWGRISMV DAEKRLLANA LEDVDNQFFV LLSDSCVPLH
201: TFDYIYNFLM GTNVSFIDCF LDPGPHGSGR YSVEMLPEIE QRDFRKGAQW FAVTRRHALL ILADHLYYNK FELYCKPAEG RNCIADEHYL PTLFNMVDPG
301: GISNWSVTHV DWSEGKWHPR SYRAIDVTYA LLKNITAIKE NFRITSDDKK VVTMTPCMWN GTKRPCYLFA RKFYPEALNN LLKHSSYTST

Best Arabidopsis Sequence Match ( AT4G31350.2 )
(BLAST)

001: MSESRQRPPF KGPRWIITLV VLVTVVVITA FIYPPRNSVA CYMFSGPGCP LYQQFLFVPT RELTDSEAAA QVVMNEIMNL PQSKTANPKL AFMFLTPGTL
101: PFEPLWEMFF RGHENKFSVY VHASKKSPVH TSSYFVGRDI HSHKVAWGQI SMVDAERRLL AHALVDPDNQ HFILLSDSCV PLFDFNYIYN HLIFANLSFI
201: DCFEDPGPHG SGRYSQHMLP EVEKKDFRKG SQWFSMKRRH AIVVMADSLY YTKFKLYCRP NMEGRNCYAD EHYFPTLFNM IDPDGIANWS VTHVDWSEGK
301: WHPKLYNARD ITPYLIRKIK SIQLAYHVTS DLKKVTTVKP CLWKGEQRPC YLFARKFNPE TLDRLMYLFP NYTSLV

Arabidopsis Description

At4g31350 [Source:UniProtKB/TrEMBL;Acc:Q8GS18]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.