Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, golgi, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- golgi 2
- plastid 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G127680.1 | Barley | cytosol, golgi, plasma membrane | 72.57 | 71.7 |
| TraesCS2D01G566600.1 | Wheat | cytosol, golgi, plasma membrane | 72.09 | 71.39 |
| TraesCS2B01G616400.1 | Wheat | golgi | 72.33 | 71.29 |
| TraesCSU01G137600.1 | Wheat | cytosol, golgi, plasma membrane | 72.57 | 70.02 |
| Zm00001d026711_P001 | Maize | cytosol, golgi, plasma membrane | 73.79 | 69.57 |
| EES11719 | Sorghum | golgi, mitochondrion, peroxisome | 74.76 | 69.06 |
| Os08t0110400-01 | Rice | cytosol, golgi, peroxisome | 64.56 | 65.36 |
| CDY31036 | Canola | golgi | 51.21 | 55.97 |
| CDX93443 | Canola | golgi | 50.97 | 54.69 |
| Os01t0875800-01 | Rice | golgi | 50.97 | 54.69 |
| PGSC0003DMT400063986 | Potato | golgi | 52.67 | 54.66 |
| CDX94911 | Canola | golgi | 50.97 | 54.55 |
| CDY20644 | Canola | golgi | 51.46 | 54.36 |
| KRH26270 | Soybean | golgi | 50.49 | 54.31 |
| GSMUA_Achr8P32350_001 | Banana | golgi, mitochondrion | 51.94 | 53.77 |
| Solyc01g103150.2.1 | Tomato | golgi | 51.7 | 53.65 |
| VIT_12s0035g01710.t01 | Wine grape | golgi | 49.27 | 53.56 |
| Bra018450.1-P | Field mustard | golgi | 51.7 | 52.72 |
| AT1G10280.1 | Thale cress | golgi | 51.94 | 51.94 |
| Bra019951.1-P | Field mustard | endoplasmic reticulum, golgi, plastid | 52.18 | 51.93 |
| KRH06031 | Soybean | golgi, plasma membrane, plastid | 49.03 | 51.27 |
| Os01t0133700-00 | Rice | cytosol | 25.97 | 48.42 |
| Os12t0635500-01 | Rice | golgi, plasma membrane, plastid | 43.45 | 43.98 |
| Os03t0731050-00 | Rice | plastid | 44.42 | 42.76 |
| Os01t0133600-00 | Rice | golgi, mitochondrion, plasma membrane, plastid | 40.78 | 40.19 |
| Os02t0327500-01 | Rice | golgi | 41.02 | 38.5 |
| Os10t0165000-01 | Rice | golgi | 37.14 | 37.87 |
| Os06t0700500-01 | Rice | golgi | 32.52 | 36.02 |
| Os06t0661900-01 | Rice | golgi | 32.04 | 34.55 |
| Os02t0175500-01 | Rice | golgi | 32.28 | 34.1 |
| Os08t0225400-01 | Rice | cytosol, golgi | 33.5 | 33.41 |
| Os01t0695200-01 | Rice | plastid | 28.16 | 31.96 |
| Os05t0170000-02 | Rice | golgi | 30.83 | 31.83 |
Protein Annotations
| MapMan:35.1 | EntrezGene:4335346 | EMBL:AK121455 | ProteinID:BAF14261.1 | ProteinID:BAS88334.1 | ProteinID:CAE01750.2 |
| ProteinID:EAZ30027.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0008375 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016740 | InterPro:Glyco_trans_14 | EnsemblPlantsGene:Os04g0272400 | EnsemblPlants:Os04t0272400-01 | PFAM:PF02485 |
| PANTHER:PTHR31042 | PANTHER:PTHR31042:SF25 | UniProt:Q7XSY3 | TMHMM:TMhelix | UniParc:UPI00001B0D9E | RefSeq:XP_015633869.1 |
| SEG:seg | : | : | : | : | : |
Description
Protein of unknown function DUF266, plant family protein. (Os04t0272400-01)
Coordinates
chr4:-:11421438..11423034
Molecular Weight (calculated)
45805.4 Da
IEP (calculated)
8.390
GRAVY (calculated)
-0.290
Length
412 amino acids
Sequence
(BLAST)
(BLAST)
001: MKPGLLKSRR SSAGDEEEGS GGSGGLPTAT RKEWCWSLGI LLKAVAALLI LMAGVLIGLA TSASLSCYYV EGSGKQAEAR RGDGGGGEGG SRCRDDGCGA
101: ALSFQRFVQP HPPWGHSMKD EELFWRASMA PRVEEYPYQR VPKVAFLFLT RGPLPFAPLW ERFFHGHEGL YSVYVHALPE YRLNVSSSSP FHGRQIPSGD
201: VSWGSITLVD AEKRLLANAL LDFSNERFVL ASESCVPVFN FPTVYEYLVN SAQSYVESYN IDVPQCAGRY NPRMAPDVLE EQWRKGSEWF EMSRDLAADI
301: VADRKYHAIF RKHCTPSCYP DEHYIPTYLH LRHGARNANR TVTWVDWSRG GPHPARFGKA TVTPAFVQAI RNNGTRCAYN GKPTTVCYLF ARKFAPSALG
401: PLLNMSTTLL EF
101: ALSFQRFVQP HPPWGHSMKD EELFWRASMA PRVEEYPYQR VPKVAFLFLT RGPLPFAPLW ERFFHGHEGL YSVYVHALPE YRLNVSSSSP FHGRQIPSGD
201: VSWGSITLVD AEKRLLANAL LDFSNERFVL ASESCVPVFN FPTVYEYLVN SAQSYVESYN IDVPQCAGRY NPRMAPDVLE EQWRKGSEWF EMSRDLAADI
301: VADRKYHAIF RKHCTPSCYP DEHYIPTYLH LRHGARNANR TVTWVDWSRG GPHPARFGKA TVTPAFVQAI RNNGTRCAYN GKPTTVCYLF ARKFAPSALG
401: PLLNMSTTLL EF
001: MARGGKEEGE KHIGLLKLAQ TLSFLLIFMA GIIIGLAASS HIDRYFNSLP RMFSSTTNLQ SIPFSTPDYS NCTIIHRDCT GNDDNESDDG GVKAEKPKVR
101: DCWSIDGFVR PENLSHGMTD DELFWRASMV PVKEEYPYDR VPKVAFMFLT RGPLPMLPLW EKFFKGNEKY LSVYVHTPPG YDMNVSRDSP FYDRQIPSQR
201: VEWGSPLLTD AEKRLLANAL LDFSNERFVL LSESCVPVYN FSTVYTYLIN SAYSFVDSYD EPTRYGRGRY SRKMLPDIKL HHWRKGSQWF EVNRKIAIYI
301: ISDSKYYSLF KQFCRPACYP DEHYIPTFLN MFHGSMNANR SVTWVDWSIG GPHPATYAAA NITEGFLQSI RKNETDCLYN EEPTSLCFLF ARKFSPSALA
401: PLMNLSSTVL GF
101: DCWSIDGFVR PENLSHGMTD DELFWRASMV PVKEEYPYDR VPKVAFMFLT RGPLPMLPLW EKFFKGNEKY LSVYVHTPPG YDMNVSRDSP FYDRQIPSQR
201: VEWGSPLLTD AEKRLLANAL LDFSNERFVL LSESCVPVYN FSTVYTYLIN SAYSFVDSYD EPTRYGRGRY SRKMLPDIKL HHWRKGSQWF EVNRKIAIYI
301: ISDSKYYSLF KQFCRPACYP DEHYIPTFLN MFHGSMNANR SVTWVDWSIG GPHPATYAAA NITEGFLQSI RKNETDCLYN EEPTSLCFLF ARKFSPSALA
401: PLMNLSSTVL GF
Arabidopsis Description
At1g10280 [Source:UniProtKB/TrEMBL;Acc:Q9SY70]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.