Factsheet for TraesCS2D01G566600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plasma membrane, golgi

Predictor Summary:

golgi 2
extracellular 1
plasma membrane 2
endoplasmic reticulum 1
vacuole 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, plasma membrane
Any Predictor:	cytosol, golgi, plasma membrane
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G616400.1	Wheat	golgi	99.04	98.56
TraesCSU01G137600.1	Wheat	cytosol, golgi, plasma membrane	98.08	95.55
HORVU2Hr1G127680.1	Barley	cytosol, golgi, plasma membrane	92.55	92.33
Os04t0272400-01	Rice	golgi, nucleus, peroxisome	71.39	72.09
Zm00001d026711_P001	Maize	cytosol, golgi, plasma membrane	71.39	67.96
TraesCS7D01G317600.1	Wheat	cytosol, golgi, peroxisome	65.87	67.65
EES11719	Sorghum	golgi, mitochondrion, peroxisome	71.88	67.04
VIT_12s0035g01710.t01	Wine grape	golgi	51.2	56.2
CDY31036	Canola	golgi	50.24	55.44
CDX93443	Canola	golgi	50.72	54.95
CDX94911	Canola	golgi	50.72	54.81
CDY20644	Canola	golgi	50.96	54.36
PGSC0003DMT400063986	Potato	golgi	51.44	53.9
GSMUA_Achr8P32350_001	Banana	golgi, mitochondrion	50.96	53.27
Solyc01g103150.2.1	Tomato	golgi	50.72	53.15
TraesCS3D01G379500.1	Wheat	golgi	49.52	52.82
KRH26270	Soybean	golgi	48.56	52.74
TraesCS1D01G394500.1	Wheat	mitochondrion	36.78	52.4
Bra018450.1-P	Field mustard	golgi	50.48	51.98
KRH06031	Soybean	golgi, plasma membrane, plastid	49.04	51.78
AT1G10280.1	Thale cress	golgi	50.96	51.46
Bra019951.1-P	Field mustard	endoplasmic reticulum, golgi, plastid	51.2	51.45
TraesCS4D01G061000.1	Wheat	golgi, plasma membrane, plastid	44.47	47.19
TraesCS3D01G043200.1	Wheat	golgi, mitochondrion, plasma membrane, plastid	39.18	40.55
TraesCS3D01G042800.2	Wheat	golgi, plasma membrane, plastid	40.38	40.38
TraesCS3D01G043100.1	Wheat	plastid	40.14	39.67
TraesCS5D01G015600.1	Wheat	cytosol, golgi, mitochondrion	40.62	38.41
TraesCS7D01G412700.1	Wheat	golgi	33.41	37.57
TraesCS3D01G042700.1	Wheat	golgi	35.82	37.44
TraesCS1D01G022300.1	Wheat	golgi, plasma membrane, vacuole	35.1	37.34
TraesCS7D01G476000.1	Wheat	golgi	33.17	36.51
TraesCS2D01G428700.2	Wheat	mitochondrion	32.93	36.05
TraesCS6D01G143800.1	Wheat	golgi	32.21	34.36
TraesCS3D01G258800.1	Wheat	golgi, mitochondrion, plastid	29.33	30.96
TraesCS1D01G115700.1	Wheat	golgi	27.64	29.56

Protein Annotations

EnsemblPlants:TraesCS2D01G566600.1	EnsemblPlantsGene:TraesCS2D01G566600	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008375
GO:GO:0016020	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042	PANTHER:PTHR31042:SF25	PFAM:PF02485
SEG:seg	TMHMM:TMhelix	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr2D:-:635650062..635651317

Molecular Weight (calculated)

47006.1 Da

IEP (calculated)

8.572

GRAVY (calculated)

-0.182

Length

416 amino acids

Sequence
(BLAST)

001: MKQLKPRRVG AGDEEAAAGV VVPPAPRKDY CCWSSWCLLK ALTLLLVLLT GVLIGFGASA NISRYYYYTL LTGTSTSSSS PPSLISSNSP TPPSTLAMSS
101: EQHISQPFMS FVHPGSPEGH SMTDAELFWR ASMVPRVEEY PYQRVPKVAF LFLTRGPLPF ARLWERFFRG HEGLYSVYVH ALPEYVLNVS ATSPFYGRQI
201: PSRDVSWGSI TLVDAEKRLL ANALLDHSNQ RFVLVSESCV PVFNFPTVYE YLINSAHSYV ESYNIDVPQC AGRYNPRMAP DVTEQQWRKG SEWFELSREL
301: AVDIVADRRY YHVFRMHCTP SCYPDEHYIP TYLHLVHGPR NANRTITWVD WSRGGPHPAR YGKASVTKEF IQAIRNNGTQ CLYNGRPTTV CYLFARKFAP
401: SALGTLINLT TTLLDF

Best Arabidopsis Sequence Match ( AT1G10280.1 )
(BLAST)

001: MARGGKEEGE KHIGLLKLAQ TLSFLLIFMA GIIIGLAASS HIDRYFNSLP RMFSSTTNLQ SIPFSTPDYS NCTIIHRDCT GNDDNESDDG GVKAEKPKVR
101: DCWSIDGFVR PENLSHGMTD DELFWRASMV PVKEEYPYDR VPKVAFMFLT RGPLPMLPLW EKFFKGNEKY LSVYVHTPPG YDMNVSRDSP FYDRQIPSQR
201: VEWGSPLLTD AEKRLLANAL LDFSNERFVL LSESCVPVYN FSTVYTYLIN SAYSFVDSYD EPTRYGRGRY SRKMLPDIKL HHWRKGSQWF EVNRKIAIYI
301: ISDSKYYSLF KQFCRPACYP DEHYIPTFLN MFHGSMNANR SVTWVDWSIG GPHPATYAAA NITEGFLQSI RKNETDCLYN EEPTSLCFLF ARKFSPSALA
401: PLMNLSSTVL GF

Arabidopsis Description

At1g10280 [Source:UniProtKB/TrEMBL;Acc:Q9SY70]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.