Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G042800.2 | Wheat | golgi, plasma membrane, plastid | 85.99 | 87.02 |
| TraesCS3D01G043200.1 | Wheat | golgi, mitochondrion, plasma membrane, plastid | 78.62 | 82.34 |
| Os01t0133700-00 | Rice | cytosol | 32.54 | 61.99 |
| TraesCS3D01G042700.1 | Wheat | golgi | 55.82 | 59.05 |
| Os01t0133600-00 | Rice | golgi, mitochondrion, plasma membrane, plastid | 55.11 | 55.5 |
| TraesCS1D01G022300.1 | Wheat | golgi, plasma membrane, vacuole | 41.81 | 45.01 |
| TraesCS1D01G394500.1 | Wheat | mitochondrion | 30.88 | 44.52 |
| TraesCS3D01G379500.1 | Wheat | golgi | 37.77 | 40.77 |
| TraesCS2D01G566600.1 | Wheat | cytosol, golgi, plasma membrane | 39.67 | 40.14 |
| TraesCS4D01G061000.1 | Wheat | golgi, plasma membrane, plastid | 36.34 | 39.03 |
| TraesCS7D01G317600.1 | Wheat | cytosol, golgi, peroxisome | 35.15 | 36.54 |
| TraesCS5D01G015600.1 | Wheat | cytosol, golgi, mitochondrion | 36.58 | 35.0 |
| TraesCS7D01G476000.1 | Wheat | golgi | 28.74 | 32.01 |
| TraesCS6D01G143800.1 | Wheat | golgi | 28.5 | 30.77 |
| TraesCS2D01G428700.2 | Wheat | mitochondrion | 27.32 | 30.26 |
| TraesCS7D01G412700.1 | Wheat | golgi | 26.37 | 30.0 |
| TraesCS3D01G258800.1 | Wheat | golgi, mitochondrion, plastid | 24.7 | 26.4 |
| TraesCS1D01G115700.1 | Wheat | golgi | 23.28 | 25.19 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G043100.1 | EnsemblPlantsGene:TraesCS3D01G043100 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0008375 |
| GO:GO:0016020 | GO:GO:0016740 | InterPro:Glyco_trans_14 | PANTHER:PTHR31042 | PANTHER:PTHR31042:SF11 | PFAM:PF02485 |
| SEG:seg | TMHMM:TMhelix | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr3D:-:16495675..16497542
Molecular Weight (calculated)
45978.7 Da
IEP (calculated)
8.468
GRAVY (calculated)
0.047
Length
421 amino acids
Sequence
(BLAST)
(BLAST)
001: MASGTAKPMP ALHSGSVLPN VLTMLLLLSI GFVLGMVCTA SFHDSYLLPF LQPLPSLLRS RSPLPPHAPA PSPVTELPSQ SPSPSPDTAC VVGPPLPSPP
101: SQQPTPSPPA SLGFADFLAP SGGLMHNMTD EELFWRASMV PRVARVPWRI VPKVAFLFLV RGDLPLRPLW EKFFAGHEGL YSIYVHASPA YTGSPPADSV
201: FYGRMIPSQN TSWGDMNLVH AERRLVATAL LDLGNARFAL LSETCIPLLS FPAAYAFLTG SNASFIDSFP TRARHVPFFT ERNVSLAQWR KGSQWFEMDR
301: PIAVELVAEE RYMAVFRGDH GIGNMEEHYL PTLVTLLGWG ARAANRTLTY VAWPRPGPHP ATYGVRDVTA ELLEGMRRGN GECGYGRAGG AVEFCFMFSR
401: KFSRDALAKL LELAPKVMGF G
101: SQQPTPSPPA SLGFADFLAP SGGLMHNMTD EELFWRASMV PRVARVPWRI VPKVAFLFLV RGDLPLRPLW EKFFAGHEGL YSIYVHASPA YTGSPPADSV
201: FYGRMIPSQN TSWGDMNLVH AERRLVATAL LDLGNARFAL LSETCIPLLS FPAAYAFLTG SNASFIDSFP TRARHVPFFT ERNVSLAQWR KGSQWFEMDR
301: PIAVELVAEE RYMAVFRGDH GIGNMEEHYL PTLVTLLGWG ARAANRTLTY VAWPRPGPHP ATYGVRDVTA ELLEGMRRGN GECGYGRAGG AVEFCFMFSR
401: KFSRDALAKL LELAPKVMGF G
001: MARGGKEEGE KHIGLLKLAQ TLSFLLIFMA GIIIGLAASS HIDRYFNSLP RMFSSTTNLQ SIPFSTPDYS NCTIIHRDCT GNDDNESDDG GVKAEKPKVR
101: DCWSIDGFVR PENLSHGMTD DELFWRASMV PVKEEYPYDR VPKVAFMFLT RGPLPMLPLW EKFFKGNEKY LSVYVHTPPG YDMNVSRDSP FYDRQIPSQR
201: VEWGSPLLTD AEKRLLANAL LDFSNERFVL LSESCVPVYN FSTVYTYLIN SAYSFVDSYD EPTRYGRGRY SRKMLPDIKL HHWRKGSQWF EVNRKIAIYI
301: ISDSKYYSLF KQFCRPACYP DEHYIPTFLN MFHGSMNANR SVTWVDWSIG GPHPATYAAA NITEGFLQSI RKNETDCLYN EEPTSLCFLF ARKFSPSALA
401: PLMNLSSTVL GF
101: DCWSIDGFVR PENLSHGMTD DELFWRASMV PVKEEYPYDR VPKVAFMFLT RGPLPMLPLW EKFFKGNEKY LSVYVHTPPG YDMNVSRDSP FYDRQIPSQR
201: VEWGSPLLTD AEKRLLANAL LDFSNERFVL LSESCVPVYN FSTVYTYLIN SAYSFVDSYD EPTRYGRGRY SRKMLPDIKL HHWRKGSQWF EVNRKIAIYI
301: ISDSKYYSLF KQFCRPACYP DEHYIPTFLN MFHGSMNANR SVTWVDWSIG GPHPATYAAA NITEGFLQSI RKNETDCLYN EEPTSLCFLF ARKFSPSALA
401: PLMNLSSTVL GF
Arabidopsis Description
At1g10280 [Source:UniProtKB/TrEMBL;Acc:Q9SY70]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.