Factsheet for TraesCS3D01G042800.2

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, plastid

Predictor Summary:

plastid 2
mitochondrion 1
golgi 3
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane, plastid
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G036900.1	Wheat	cytosol	65.87	92.26
TraesCS3D01G043100.1	Wheat	plastid	87.02	85.99
TraesCS3D01G043200.1	Wheat	golgi, mitochondrion, plasma membrane, plastid	76.44	79.1
Os01t0133700-00	Rice	cytosol	32.21	60.63
TraesCS3D01G042700.1	Wheat	golgi	57.45	60.05
Os01t0133600-00	Rice	golgi, mitochondrion, plasma membrane, plastid	56.97	56.7
TraesCS1D01G022300.1	Wheat	golgi, plasma membrane, vacuole	42.79	45.52
TraesCS1D01G394500.1	Wheat	mitochondrion	31.73	45.21
TraesCS3D01G379500.1	Wheat	golgi	39.42	42.05
TraesCS2D01G566600.1	Wheat	cytosol, golgi, plasma membrane	40.38	40.38
TraesCS7D01G317600.1	Wheat	cytosol, golgi, peroxisome	37.5	38.52
TraesCS4D01G061000.1	Wheat	golgi, plasma membrane, plastid	36.06	38.27
TraesCS5D01G015600.1	Wheat	cytosol, golgi, mitochondrion	36.3	34.32
TraesCS7D01G476000.1	Wheat	golgi	29.33	32.28
TraesCS7D01G412700.1	Wheat	golgi	27.64	31.08
TraesCS6D01G143800.1	Wheat	golgi	28.85	30.77
TraesCS2D01G428700.2	Wheat	mitochondrion	27.88	30.53
TraesCS3D01G258800.1	Wheat	golgi, mitochondrion, plastid	26.92	28.43
TraesCS1D01G115700.1	Wheat	golgi	24.04	25.71

Protein Annotations

EnsemblPlants:TraesCS3D01G042800.2	EnsemblPlantsGene:TraesCS3D01G042800	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008375
GO:GO:0016020	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042	PANTHER:PTHR31042:SF11	PFAM:PF02485
SEG:seg	TMHMM:TMhelix	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr3D:-:16378242..16379737

Molecular Weight (calculated)

45186.6 Da

IEP (calculated)

7.640

GRAVY (calculated)

0.077

Length

416 amino acids

Sequence
(BLAST)

001: MASSTAKHMP ALHSGSVLPN VVTMLLLLSI GFVLGMVCTA NFHESYLPPF LQPLPSLLRS PSPPPPVTEL PSQSPSPSPE TACVVGPPLP SPPSQQPTPS
101: PPAILGFADF LAPSGGLMHN MTDDELLWRA SMVPRVARVP WRIVPKVAFL FLVRGDLPLR PLWEKFFAGH EGLYSIYVHA SPAYTGSPPA DSVFYGRMIP
201: SQNTSWGDMN LVDAERRLVA TALLDLANAR FALLSESCIP LLPFPAVYAF LTGSNASFVD SYVDGARHAP FFTQHNVSLA QWRKGSQWFE MDRAIAVVVV
301: AEEQFMAVFR GNHGVANMEE HYLPTLVTLL GWGASNANRT LTYAKWRAGA WHPASYGGRA VTPELLEGMR RGNGECGYRS KDGGGAVEFC FMFARKFSGD
401: ALGKLLELAP KVMGFG

Best Arabidopsis Sequence Match ( AT1G10280.1 )
(BLAST)

001: MARGGKEEGE KHIGLLKLAQ TLSFLLIFMA GIIIGLAASS HIDRYFNSLP RMFSSTTNLQ SIPFSTPDYS NCTIIHRDCT GNDDNESDDG GVKAEKPKVR
101: DCWSIDGFVR PENLSHGMTD DELFWRASMV PVKEEYPYDR VPKVAFMFLT RGPLPMLPLW EKFFKGNEKY LSVYVHTPPG YDMNVSRDSP FYDRQIPSQR
201: VEWGSPLLTD AEKRLLANAL LDFSNERFVL LSESCVPVYN FSTVYTYLIN SAYSFVDSYD EPTRYGRGRY SRKMLPDIKL HHWRKGSQWF EVNRKIAIYI
301: ISDSKYYSLF KQFCRPACYP DEHYIPTFLN MFHGSMNANR SVTWVDWSIG GPHPATYAAA NITEGFLQSI RKNETDCLYN EEPTSLCFLF ARKFSPSALA
401: PLMNLSSTVL GF

Arabidopsis Description

At1g10280 [Source:UniProtKB/TrEMBL;Acc:Q9SY70]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.