Factsheet for TraesCS2D01G428700.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	golgi, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	golgi
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G452200.4	Wheat	mitochondrion	97.63	97.63
HORVU2Hr1G100480.3	Barley	cytosol	82.37	96.31
TraesCS2A01G430900.2	Wheat	mitochondrion	97.37	95.85
Zm00001d026261_P001	Maize	golgi, mitochondrion	78.68	78.07
EES12818	Sorghum	golgi	79.47	78.04
Zm00001d002382_P002	Maize	golgi, mitochondrion	78.95	77.52
TraesCS7D01G476000.1	Wheat	golgi	64.21	64.55
VIT_04s0008g02630.t01	Wine grape	golgi	65.79	63.94
TraesCS7D01G412700.1	Wheat	golgi	60.79	62.43
KRH19073	Soybean	golgi	62.63	60.56
Bra011262.1-P	Field mustard	golgi	59.74	60.37
CDY28259	Canola	golgi	59.74	60.37
CDX68738	Canola	golgi	59.47	60.11
VIT_11s0103g00490.t01	Wine grape	golgi, plastid	63.42	59.8
AT4G31350.4	Thale cress	golgi	58.68	59.31
PGSC0003DMT400073984	Potato	golgi	61.05	59.03
CDX89388	Canola	cytosol	35.0	58.33
Solyc07g008940.2.1	Tomato	golgi	60.26	58.27
TraesCS6D01G143800.1	Wheat	golgi	58.95	57.44
KRH02808	Soybean	golgi	62.37	56.43
KRH16109	Soybean	mitochondrion	57.37	55.33
KRH05009	Soybean	golgi, mitochondrion	56.84	54.82
AT5G57270.5	Thale cress	golgi	55.79	54.64
CDY38285	Canola	golgi	55.26	53.98
Bra002743.1-P	Field mustard	golgi	55.26	53.98
CDY11878	Canola	golgi	55.0	53.73
CDX88613	Canola	golgi	55.0	53.73
CDY25922	Canola	golgi	55.0	53.73
Bra036729.1-P	Field mustard	mitochondrion	55.0	52.78
CDY03361	Canola	mitochondrion	54.74	52.66
CDY51089	Canola	golgi, mitochondrion	54.74	52.66
Bra010307.1-P	Field mustard	golgi, mitochondrion	55.53	52.62
AT2G19160.1	Thale cress	golgi, mitochondrion	54.47	52.54
CDY66853	Canola	mitochondrion	54.74	52.53
CDX82625	Canola	mitochondrion	54.47	52.41
AT4G30060.1	Thale cress	golgi	55.26	52.37
CDY12850	Canola	mitochondrion	54.74	52.26
CDX83505	Canola	mitochondrion	54.74	52.26
Bra038843.1-P	Field mustard	mitochondrion	54.74	52.26
CDY49466	Canola	cytosol	35.26	52.14
Bra012167.1-P	Field mustard	mitochondrion	54.74	52.13
CDY01412	Canola	mitochondrion	54.74	52.13
CDY03552	Canola	golgi, mitochondrion	55.0	52.12
Bra013927.1-P	Field mustard	golgi, plastid	49.74	51.64
CDX94406	Canola	golgi	51.32	51.45
CDX92736	Canola	mitochondrion	51.05	51.19
AT4G25870.1	Thale cress	cytosol, golgi, mitochondrion, plastid	52.37	51.16
CDY42774	Canola	mitochondrion	50.53	50.66
CDY30178	Canola	mitochondrion	53.42	50.5
CDY46724	Canola	mitochondrion	53.16	50.12
Bra024111.1-P	Field mustard	mitochondrion	49.21	49.87
Bra019138.1-P	Field mustard	plastid	48.42	47.18
Bra010446.1-P	Field mustard	mitochondrion	47.37	46.27
CDY66012	Canola	mitochondrion	43.16	44.93
CDY57290	Canola	cytosol	40.0	43.93
TraesCS1D01G394500.1	Wheat	mitochondrion	31.32	40.75
CDY14193	Canola	mitochondrion	55.53	40.27
TraesCS4D01G061000.1	Wheat	golgi, plasma membrane, plastid	37.89	36.73
TraesCS3D01G379500.1	Wheat	golgi	35.26	34.36
TraesCS2D01G566600.1	Wheat	cytosol, golgi, plasma membrane	36.05	32.93
TraesCS7D01G317600.1	Wheat	cytosol, golgi, peroxisome	33.68	31.6
TraesCS1D01G022300.1	Wheat	golgi, plasma membrane, vacuole	31.58	30.69
TraesCS1D01G115700.1	Wheat	golgi	31.32	30.59
TraesCS3D01G043200.1	Wheat	golgi, mitochondrion, plasma membrane, plastid	31.32	29.6
TraesCS5D01G015600.1	Wheat	cytosol, golgi, mitochondrion	34.21	29.55
TraesCS3D01G258800.1	Wheat	golgi, mitochondrion, plastid	30.26	29.19
TraesCS3D01G042700.1	Wheat	golgi	30.53	29.15
TraesCS3D01G042800.2	Wheat	golgi, plasma membrane, plastid	30.53	27.88
TraesCS3D01G043100.1	Wheat	plastid	30.26	27.32

Protein Annotations

EnsemblPlants:TraesCS2D01G428700.2	EnsemblPlantsGene:TraesCS2D01G428700	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008375
GO:GO:0016020	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042	PANTHER:PTHR31042:SF13	PFAM:PF02485
SEG:seg	TMHMM:TMhelix	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr2D:+:540815497..540818722

Molecular Weight (calculated)

43976.5 Da

IEP (calculated)

8.602

GRAVY (calculated)

-0.360

Length

380 amino acids

Sequence
(BLAST)

001: MKAAPLPRTR AAASPRRRAW ILAVAALVSV VVVWAYHYPP QHYASPVSNW LPVEPDRELT DDERASRVVF GHILSTPPVR SRGSKIAFMF LTPGNLPFEK
101: LWEKFFEGHE GRYTIYVHAS REKPEHVSRL FIGRDIHSDK VQWGQISMVD AERRLLANAL QDIDNQHFVL LSDSCVPLHK FDYVYDYLMG TNLSFIDSFY
201: DPGPHGNFRY SQNMLPEVRE SDFRKGSQWF SVKRQHALMT IADSLYYTKF KLYCKPGMEG GCNCYADEHY MPTLFNMMDP NGIANWSVTH VDWSEGKWHP
301: KAYRAQDVTY GLLKNITSID MSHHVTSDSK KVVTQNPCLW NGVKKPCYLF ARKFYPESMN NLINICTFGR TLDLLTSWWI

Best Arabidopsis Sequence Match ( AT4G30060.1 )
(BLAST)

001: MKAVKRWSIG NLADIPVSLP GARYRAPPPG RRRVWIIMVL SLITMFFIMA YMYPHHSKRA CYMISSRGCK ALADWLPPSL REYSDDEIAA RVVIREILSS
101: PPVIRKNSKI AFMFLTPGTL PFERLWDRFF LGHEGKFSVY IHASKERPVH YSRYFLNREI RSDEVVWGRI SMVDAERRLL ANALRDTSNQ QFVLLSDSCV
201: PLRSFEYIYN YLMHSNLSYV DCFDDPGQHG AGRHMNHMLP EIPKKDFRKG AQWFTMKRQH AVATMADSLY YSKFRDYCGP GIENNKNCIA DEHYLPTFFH
301: MLDPGGIANW TVTQVDWSER KWHPKTYMPE DITHELLNNL TSTDTLVHVT SVGMGEEIWM PCMWNGIQRP CYLFGRKFHP DTLDKLLDLF SNYTRSVTWN
401: L

Arabidopsis Description

Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q8W4E9]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.