Factsheet for VIT_04s0008g02630.t01

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 3
mitochondrion 3
golgi 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_11s0103g00490.t01	Wine grape	golgi, plastid	73.91	71.71
HORVU2Hr1G100480.3	Barley	cytosol	58.82	70.77
Bra011262.1-P	Field mustard	golgi	65.73	68.35
CDX68738	Canola	golgi	65.73	68.35
CDY28259	Canola	golgi	65.73	68.35
AT4G31350.4	Thale cress	golgi	65.47	68.09
Zm00001d024348_P002	Maize	mitochondrion	63.43	67.03
Zm00001d026261_P001	Maize	golgi, mitochondrion	65.47	66.84
KXG24737	Sorghum	golgi	65.22	66.58
EES12818	Sorghum	golgi	65.73	66.41
TraesCS2B01G452200.4	Wheat	mitochondrion	64.19	66.05
TraesCS2D01G428700.2	Wheat	mitochondrion	63.94	65.79
Zm00001d002382_P002	Maize	golgi, mitochondrion	64.71	65.37
KRH16109	Soybean	mitochondrion	65.22	64.72
TraesCS2A01G430900.2	Wheat	mitochondrion	63.68	64.51
KRH05009	Soybean	golgi, mitochondrion	64.45	63.96
Os08t0225400-01	Rice	cytosol, golgi	63.94	60.53
VIT_17s0000g03410.t01	Wine grape	cytosol	32.74	43.39
VIT_17s0000g03400.t01	Wine grape	cytosol	32.74	43.24
VIT_14s0006g02700.t01	Wine grape	cytosol	32.48	42.91
VIT_09s0002g02660.t01	Wine grape	cytosol	32.23	42.86
VIT_01s0011g03840.t01	Wine grape	cytosol	31.71	41.89
VIT_17s0000g03420.t01	Wine grape	cytosol	31.2	41.5
VIT_14s0066g00820.t01	Wine grape	cytosol, golgi, mitochondrion, plastid	29.41	35.49
VIT_04s0008g00690.t01	Wine grape	golgi, nucleus, plasma membrane, plastid	34.78	35.32
VIT_12s0035g01710.t01	Wine grape	golgi	32.99	34.04
VIT_01s0011g03850.t01	Wine grape	golgi, plastid	32.99	31.85
VIT_10s0116g00980.t01	Wine grape	golgi	30.95	31.84

Protein Annotations

EntrezGene:100257774	wikigene:100257774	MapMan:35.1	ProteinID:CBI20781	ProteinID:CBI20781.3	UniProt:D7SU32
EMBL:FN595231	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008375	GO:GO:0016020
GO:GO:0016021	GO:GO:0016740	InterPro:Glyco_trans_14	EntrezGene:LOC100257774	wikigene:LOC100257774	PFAM:PF02485
PANTHER:PTHR31042	PANTHER:PTHR31042:SF29	TMHMM:TMhelix	UniParc:UPI00015C923D	ArrayExpress:VIT_04s0008g02630	EnsemblPlantsGene:VIT_04s0008g02630
EnsemblPlants:VIT_04s0008g02630.t01	unigene:Vvi.3306	RefSeq:XP_002282865	RefSeq:XP_002282865.1	RefSeq:XP_019075018.1	RefSeq:XP_019075019.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr4:-:2154441..2164692

Molecular Weight (calculated)

45559.9 Da

IEP (calculated)

8.445

GRAVY (calculated)

-0.315

Length

391 amino acids

Sequence
(BLAST)

001: MKTARAWQLG IKDMLIMSGS RQRPHLKRPI WIIVLVSLVS ICLIGAYIYP PRSSAACYIF SSRDCSIYEQ PIHVPSRELT DDETAAQVVI REILKTPPVH
101: SKNPKIAFMF LTPGSLPFEK LWDRFFHGHE DRFTVYVHAS SEKPAHVSRY FIGRDIRSEK VIWGKISMVD AEKRLLGHAL EDPNNQHFVL LSDSCVPLHN
201: FDYVYNYLMF TNISYIDCFE DPGPHGNGRY SDHMMPEVEV KDFRKGAQWF SMKRQHAIIV MADSLYYTKF KLYCRPGMDG RNCYADEHYL PTLFNMIDPT
301: GIANWSVTHV DWSEGKWHPK AYRGQDVSYE LLRNITAIDM SYHVTSNEKK KMMIQPCLWN GVKRPCYLFA RKFYPEAQDN LLHLFSNYTT V

Best Arabidopsis Sequence Match ( AT4G31350.2 )
(BLAST)

001: MSESRQRPPF KGPRWIITLV VLVTVVVITA FIYPPRNSVA CYMFSGPGCP LYQQFLFVPT RELTDSEAAA QVVMNEIMNL PQSKTANPKL AFMFLTPGTL
101: PFEPLWEMFF RGHENKFSVY VHASKKSPVH TSSYFVGRDI HSHKVAWGQI SMVDAERRLL AHALVDPDNQ HFILLSDSCV PLFDFNYIYN HLIFANLSFI
201: DCFEDPGPHG SGRYSQHMLP EVEKKDFRKG SQWFSMKRRH AIVVMADSLY YTKFKLYCRP NMEGRNCYAD EHYFPTLFNM IDPDGIANWS VTHVDWSEGK
301: WHPKLYNARD ITPYLIRKIK SIQLAYHVTS DLKKVTTVKP CLWKGEQRPC YLFARKFNPE TLDRLMYLFP NYTSLV

Arabidopsis Description

At4g31350 [Source:UniProtKB/TrEMBL;Acc:Q8GS18]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.