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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • plastid 1
  • mitochondrion 2
  • golgi 4
  • extracellular 2
  • plasma membrane 2
  • endoplasmic reticulum 2
  • vacuole 3
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:golgi
Predotar:secretory
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:vacuole
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra011262.1-P Field mustard golgi 99.47 99.47
CDY28259 Canola golgi 99.47 99.47
AT4G31350.4 Thale cress golgi 93.62 93.62
VIT_04s0008g02630.t01 Wine grape golgi 68.35 65.73
HORVU2Hr1G100480.3 Barley cytosol 55.59 64.31
Zm00001d024348_P002 Maize mitochondrion 59.31 60.27
KXG24737 Sorghum golgi 60.64 59.53
TraesCS2D01G428700.2 Wheat mitochondrion 60.11 59.47
TraesCS2B01G452200.4 Wheat mitochondrion 59.84 59.21
CDX89388 Canola cytosol 35.9 59.21
Zm00001d026261_P001 Maize golgi, mitochondrion 60.11 59.01
EES12818 Sorghum golgi 60.64 58.91
TraesCS2A01G430900.2 Wheat mitochondrion 60.11 58.55
KRH05009 Soybean golgi, mitochondrion 60.9 58.12
KRH16109 Soybean mitochondrion 60.64 57.87
Zm00001d002382_P002 Maize golgi, mitochondrion 59.31 57.62
Os08t0225400-01 Rice cytosol, golgi 60.11 54.72
CDY49466 Canola cytosol 37.23 54.47
CDY66853 Canola mitochondrion 56.65 53.79
CDY03361 Canola mitochondrion 56.38 53.67
CDY51089 Canola golgi, mitochondrion 55.85 53.16
CDY12850 Canola mitochondrion 55.85 52.76
CDX83505 Canola mitochondrion 55.85 52.76
CDY38285 Canola golgi 54.52 52.7
CDY01412 Canola mitochondrion 55.85 52.63
CDY46724 Canola mitochondrion 56.38 52.61
CDY30178 Canola mitochondrion 56.12 52.49
CDY25922 Canola golgi 54.26 52.44
CDY03552 Canola golgi, mitochondrion 55.85 52.37
CDX82625 Canola mitochondrion 54.79 52.15
CDX88613 Canola golgi 53.46 51.67
CDY11878 Canola golgi 53.46 51.67
CDX92736 Canola mitochondrion 51.33 50.92
CDX94406 Canola golgi 51.06 50.66
CDY42774 Canola mitochondrion 50.53 50.13
CDY66012 Canola mitochondrion 45.48 46.85
CDY57290 Canola cytosol 39.63 43.06
CDX80552 Canola cytosol 17.29 42.48
CDY14193 Canola mitochondrion 56.12 40.27
CDX78440 Canola cytosol 32.98 38.39
CDY19328 Canola golgi, mitochondrion 38.03 37.83
CDY31036 Canola golgi 36.44 36.34
CDX69735 Canola golgi 37.23 36.27
CDY51451 Canola golgi 36.44 35.96
CDX94911 Canola golgi 36.7 35.84
CDX97141 Canola golgi 36.7 35.75
CDX97139 Canola golgi 36.7 35.75
CDX73016 Canola mitochondrion 32.98 35.73
CDY56916 Canola cytosol, golgi, plasma membrane, plastid 35.9 35.43
CDX87842 Canola golgi 36.44 35.22
CDY43927 Canola golgi 36.44 35.22
CDX93443 Canola golgi 35.9 35.16
CDY20644 Canola golgi 36.44 35.13
CDY20597 Canola golgi 31.38 34.71
CDX70417 Canola cytosol 27.66 34.67
CDX88209 Canola golgi 31.65 34.0
CDX78439 Canola golgi 35.9 33.67
CDX97140 Canola golgi 36.44 33.41
CDY44904 Canola golgi 36.44 33.41
CDX81507 Canola golgi 36.44 33.41
CDX69574 Canola mitochondrion 32.18 33.06
CDY09869 Canola mitochondrion 32.18 33.06
CDX96025 Canola golgi, vacuole 35.9 32.45
CDX78674 Canola cytosol, golgi, plasma membrane 34.57 32.26
CDY59035 Canola golgi 35.9 32.07
CDX69465 Canola golgi 34.31 31.85
CDX70676 Canola cytosol, golgi, nucleus 34.04 31.84
CDX96026 Canola golgi 33.51 31.82
CDY24895 Canola mitochondrion 30.85 31.1
CDY08638 Canola mitochondrion 30.85 30.61
CDY31228 Canola golgi 30.05 30.54
CDX70416 Canola golgi 35.37 30.43
CDY21023 Canola golgi 30.32 30.32
CDY34605 Canola golgi 28.99 28.84
CDY26504 Canola cytosol 11.44 28.29
CDY70337 Canola golgi 26.33 26.54
CDY66259 Canola cytosol 26.33 23.02
CDX97918 Canola golgi 35.9 21.39
CDX73017 Canola cytosol 0.53 14.29
Protein Annotations
EnsemblPlants:CDX68738EnsemblPlantsGene:GSBRNA2T00130434001GO:A0A078C0P8GO:GO:0003674GO:GO:0003824GO:GO:0005575
GO:GO:0008375GO:GO:0016020GO:GO:0016740InterPro:Glyco_trans_14PANTHER:PTHR31042PANTHER:PTHR31042:SF29
PFAM:PF02485ProteinID:CDX68738ProteinID:CDX68738.1SEG:segTMHMM:TMhelixUniParc:UPI0004EDB040
MapMan:35.1:::::
Description
BnaC01g07150D
Coordinates
chrLK031789:+:1039519..1042418
Molecular Weight (calculated)
43800.0 Da
IEP (calculated)
9.056
GRAVY (calculated)
-0.251
Length
376 amino acids
Sequence
(BLAST)
001: MSESRQRPPF KGPRWIITLV ALVTLVVITA LIYPPRNSVT CYMFSGPGCQ LYQQFLFVPS RELTDTEAAA QVVTNEIMNL PESKTANPKI AFMFLTPGAL
101: PFEPLWEMFL RGHENKFSIY VHASKKSPAH TSNYFVGRDI HSHKVAWGQI SMVDAERRLL AHALIDPDNQ HFVLLSDSCV PLFDFNYIYN HLIYANLSFI
201: DCFEDPGPHG NGRYSQHMLP EVEKKDFRKG SQWFSMKRRH AIVVMADSLY YTKFKLYCRP KMEGRNCYAD EHYFPTLFNM IDPIGIANWS VTHVDWSEGK
301: WHPRLYNARD ITPYLLRKIK SIQLAYHVTS DLKKVTTVRP CLWKGEQRPC YLFARKFNPE TLDRLMYLFP NYTSLV
Best Arabidopsis Sequence Match ( AT4G31350.2 )
(BLAST)
001: MSESRQRPPF KGPRWIITLV VLVTVVVITA FIYPPRNSVA CYMFSGPGCP LYQQFLFVPT RELTDSEAAA QVVMNEIMNL PQSKTANPKL AFMFLTPGTL
101: PFEPLWEMFF RGHENKFSVY VHASKKSPVH TSSYFVGRDI HSHKVAWGQI SMVDAERRLL AHALVDPDNQ HFILLSDSCV PLFDFNYIYN HLIFANLSFI
201: DCFEDPGPHG SGRYSQHMLP EVEKKDFRKG SQWFSMKRRH AIVVMADSLY YTKFKLYCRP NMEGRNCYAD EHYFPTLFNM IDPDGIANWS VTHVDWSEGK
301: WHPKLYNARD ITPYLIRKIK SIQLAYHVTS DLKKVTTVKP CLWKGEQRPC YLFARKFNPE TLDRLMYLFP NYTSLV
Arabidopsis Description
At4g31350 [Source:UniProtKB/TrEMBL;Acc:Q8GS18]
SUBAcon: [golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.