Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX80552 | Canola | cytosol | 40.13 | 39.87 |
| Bra008639.1-P | Field mustard | golgi | 74.34 | 27.9 |
| CDX69465 | Canola | golgi | 74.34 | 27.9 |
| CDX70676 | Canola | cytosol, golgi, nucleus | 67.11 | 25.37 |
| CDX78674 | Canola | cytosol, golgi, plasma membrane | 66.45 | 25.06 |
| VIT_14s0006g02700.t01 | Wine grape | cytosol | 48.03 | 24.66 |
| AT5G16170.1 | Thale cress | golgi | 66.45 | 24.57 |
| KRH46947 | Soybean | cytosol | 46.71 | 23.59 |
| KRH01729 | Soybean | cytosol | 46.71 | 23.59 |
| CDX89388 | Canola | cytosol | 27.63 | 18.42 |
| CDY20597 | Canola | golgi | 38.16 | 17.06 |
| CDX88209 | Canola | golgi | 38.82 | 16.86 |
| CDX93443 | Canola | golgi | 42.11 | 16.67 |
| CDX94911 | Canola | golgi | 41.45 | 16.36 |
| CDX97141 | Canola | golgi | 41.45 | 16.32 |
| CDX97139 | Canola | golgi | 41.45 | 16.32 |
| CDX69735 | Canola | golgi | 41.45 | 16.32 |
| CDY31036 | Canola | golgi | 40.13 | 16.18 |
| CDY20644 | Canola | golgi | 40.79 | 15.9 |
| CDY19328 | Canola | golgi, mitochondrion | 39.47 | 15.87 |
| CDX87842 | Canola | golgi | 40.13 | 15.68 |
| CDY49466 | Canola | cytosol | 26.32 | 15.56 |
| CDX73016 | Canola | mitochondrion | 35.53 | 15.56 |
| CDY43927 | Canola | golgi | 39.47 | 15.42 |
| CDY51451 | Canola | golgi | 38.16 | 15.22 |
| CDY56916 | Canola | cytosol, golgi, plasma membrane, plastid | 38.16 | 15.22 |
| CDX97140 | Canola | golgi | 40.13 | 14.88 |
| CDX78439 | Canola | golgi | 38.16 | 14.46 |
| CDX96025 | Canola | golgi, vacuole | 39.47 | 14.42 |
| CDY59035 | Canola | golgi | 39.47 | 14.25 |
| CDX81507 | Canola | golgi | 38.16 | 14.15 |
| CDY44904 | Canola | golgi | 38.16 | 14.15 |
| CDY70337 | Canola | golgi | 34.21 | 13.94 |
| CDX78440 | Canola | cytosol | 29.61 | 13.93 |
| CDX70416 | Canola | golgi | 39.47 | 13.73 |
| CDX96026 | Canola | golgi | 34.87 | 13.38 |
| CDY38285 | Canola | golgi | 32.24 | 12.6 |
| CDY25922 | Canola | golgi | 32.24 | 12.6 |
| CDY30178 | Canola | mitochondrion | 32.24 | 12.19 |
| CDY46724 | Canola | mitochondrion | 32.24 | 12.16 |
| CDY11878 | Canola | golgi | 30.92 | 12.08 |
| CDX88613 | Canola | golgi | 30.92 | 12.08 |
| CDY03552 | Canola | golgi, mitochondrion | 31.58 | 11.97 |
| CDY12850 | Canola | mitochondrion | 30.92 | 11.81 |
| CDX83505 | Canola | mitochondrion | 30.92 | 11.81 |
| CDY01412 | Canola | mitochondrion | 30.92 | 11.78 |
| CDX70417 | Canola | cytosol | 23.03 | 11.67 |
| CDX82625 | Canola | mitochondrion | 30.26 | 11.65 |
| CDY66853 | Canola | mitochondrion | 30.26 | 11.62 |
| CDY28259 | Canola | golgi | 28.29 | 11.44 |
| CDX68738 | Canola | golgi | 28.29 | 11.44 |
| CDY03361 | Canola | mitochondrion | 29.61 | 11.39 |
| CDX92736 | Canola | mitochondrion | 28.29 | 11.35 |
| CDY51089 | Canola | golgi, mitochondrion | 28.95 | 11.14 |
| CDY42774 | Canola | mitochondrion | 27.63 | 11.08 |
| CDX94406 | Canola | golgi | 27.63 | 11.08 |
| CDY66012 | Canola | mitochondrion | 26.32 | 10.96 |
| CDY09869 | Canola | mitochondrion | 26.32 | 10.93 |
| CDX69574 | Canola | mitochondrion | 26.32 | 10.93 |
| CDY34605 | Canola | golgi | 25.66 | 10.32 |
| CDY21023 | Canola | golgi | 25.0 | 10.11 |
| CDY31228 | Canola | golgi | 24.34 | 10.0 |
| CDX97918 | Canola | golgi | 40.79 | 9.83 |
| CDY24895 | Canola | mitochondrion | 23.68 | 9.65 |
| CDY08638 | Canola | mitochondrion | 23.68 | 9.5 |
| CDY14193 | Canola | mitochondrion | 31.58 | 9.16 |
| CDY57290 | Canola | cytosol | 19.74 | 8.67 |
| CDY66259 | Canola | cytosol | 24.34 | 8.6 |
| CDX73017 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY26504 | EnsemblPlantsGene:GSBRNA2T00035320001 | GO:A0A078GMQ8 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0008375 | GO:GO:0016020 | GO:GO:0016740 | InterPro:Glyco_trans_14 | PANTHER:PTHR31042 | PANTHER:PTHR31042:SF27 |
| PFAM:PF02485 | ProteinID:CDY26504 | ProteinID:CDY26504.1 | SEG:seg | UniParc:UPI0004EE1AE2 | UniProt:A0A078GMQ8 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaC09g41640DBnaC09g41640D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GMQ8]
Coordinates
chrLK032190:+:525036..525808
Molecular Weight (calculated)
17963.8 Da
IEP (calculated)
9.161
GRAVY (calculated)
-0.282
Length
152 amino acids
Sequence
(BLAST)
(BLAST)
001: MYPQINITHW RKGSQWFETT RELALHIIED TVYYKIFDQY CKPPCYMEEH YIPTFVHMLH GEMSANRSLT WVDWSRAGPH PARFIWPDVT AEFLNRIRFT
101: DKCPYYVLSY GMGYIRPRHP GLRIGSCRIR VLGSGSGSVG SCRVRILRFL EI
101: DKCPYYVLSY GMGYIRPRHP GLRIGSCRIR VLGSGSGSVG SCRVRILRFL EI
001: MSISDHKSKK EEEQYPMITK PLRLILLQKG SYVLSSLFFV FGFSVGLFLC LQLKAVHMST TTTQRQPLWS TLLFNHTVHT TEMDIKQELQ LQVLQHNMSD
101: QELFTKASSL SSPTSSLSSS SWLGRRHNND GKMAVKVAFM FMTGGRLPLA GLWEKFFEGH EGFYSIYVHT NPSFQDSFPE TSVFYSRRIP SQPVYWGTSS
201: MVDAEKRLLA NALLDESNQR FVLLSDSCIP LYNFTTIYDY LTGTNLSFIG SFDDPRKSGR GRYNHTMYPH INITHWRKGS QWFETTRELA LHIIEDTVYY
301: KIFDQHCKPP CYMDEHYIPT LVHMLHGEMS ANRTLTWVDW SKAGPHPGRF IWPDITDEFL NRIRFKEECV YFGRGGENVT TSKCFLFARK FTAETLEPLL
401: RISPIVLGFG P
101: QELFTKASSL SSPTSSLSSS SWLGRRHNND GKMAVKVAFM FMTGGRLPLA GLWEKFFEGH EGFYSIYVHT NPSFQDSFPE TSVFYSRRIP SQPVYWGTSS
201: MVDAEKRLLA NALLDESNQR FVLLSDSCIP LYNFTTIYDY LTGTNLSFIG SFDDPRKSGR GRYNHTMYPH INITHWRKGS QWFETTRELA LHIIEDTVYY
301: KIFDQHCKPP CYMDEHYIPT LVHMLHGEMS ANRTLTWVDW SKAGPHPGRF IWPDITDEFL NRIRFKEECV YFGRGGENVT TSKCFLFARK FTAETLEPLL
401: RISPIVLGFG P
Arabidopsis Description
At5g16170 [Source:UniProtKB/TrEMBL;Acc:Q4V3A2]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.